DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6231 and oct-1

DIOPT Version :9

Sequence 1:NP_001262734.1 Gene:CG6231 / 42339 FlyBaseID:FBgn0038720 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_492617.4 Gene:oct-1 / 172841 WormBaseID:WBGene00003842 Length:585 Species:Caenorhabditis elegans


Alignment Length:551 Identity:153/551 - (27%)
Similarity:259/551 - (47%) Gaps:64/551 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DFDQILAKCGDFNRYQFMILALFGFINIIVSM-HYFTQTVISFV---PDHWC-------YHDKLV 55
            |||.:|.:.|::..||   :..|..|.:..|: ..|:...|.||   |.|.|       |...|.
 Worm    25 DFDFVLEQVGNYGTYQ---IVFFFIICLPTSLPSAFSAFNIPFVVGNPPHTCHIPEGKEYLRPLT 86

  Fly    56 N----MTYKEIGE----IYAQFENPSCTRLDDINGHNVTVSSKACEK-WIYNYDFGYRSMNTELN 111
            |    ::.|:..|    ::..|.:.      .::.::..:|...|:. |.|:......|:.||.|
 Worm    87 NDTQILSCKQYNETQINVFRAFTSA------PVDTYSDRISLVPCQNGWDYDNSTYLDSLVTEFN 145

  Fly   112 WVCDSAYKARIGQSLFFIGSVVGTLFYGLLSDKIGR-------VPALILSNFCGFAGDFSTIFTK 169
            .|||......|..:.|::||.:|...:|.::||.||       :..||:   ||.|..|:    |
 Worm   146 LVCDQQAWIEISTTSFYVGSFIGNCLFGYVADKFGRRRSFFVILTVLIV---CGTASSFA----K 203

  Fly   170 SVATFTLCRFISGLAADTNFYLMYIIVLEYIRPSMRTLGLNMAVGLFYCLGLVFTPWLAVLVGHW 234
            .:.:|.:.||.:|||....|.:.:||.:|::..|.|... .:...||:...:.....:|:.:..|
 Worm   204 DIESFIILRFFTGLAFPALFQIPFIICMEFMGNSGRIFS-GLMTSLFFGAAMALLGVVAMFIRRW 267

  Fly   235 -QIYLACTSLPILLVVLYYFVVQESAQWLVTRNDIDGAIVRLKRVAKFNGCRVSQADFDE----F 294
             |:...|.: |....::|||.:.||.:|.|:......|..:||::||.||  .|..|.||    .
 Worm   268 RQLTFFCNA-PFAFYIIYYFFLPESPRWSVSVGKWADAKKQLKKIAKMNG--KSNVDVDELVDSM 329

  Fly   295 RRHCQMTHEMLGGDDKKQATLLDMFRTPRMRKNTLILFFKSMVITLCYDAVSRNVEGMGISPFIM 359
            :.|.....|.   :.|:...:.|:|:||.:|:.|||:.:..::..:.|:.::.||..:.:..:..
 Worm   330 KNHQNAAEEK---ETKRSHNVTDLFKTPNLRRKTLIVTYIWVMNAIIYNGLTLNVSNLPVDDYWS 391

  Fly   360 FSLSALAVLPSSVLLVLLQDRIGRKGMASGSLLVGGLFTAAAGIAIAYQQHNHNAILLACLTIAA 424
            |.::....||...::..|....||:...:.:::|.|:     |...|....:....|:|..:...
 Worm   392 FIINGAVELPGYFVVWPLLQCAGRRWTLAATMIVCGI-----GCVSAMFMPDGYPWLVASASFIG 451

  Fly   425 RFGVAISYESGSQYATELIPTCVR--GQGVAAVHVAGFAASFLAPYILWLGTFFKAAPSIILGVL 487
            :|||...:.....:|.||.||.||  |.|:::: ||| :...|||:|:.||...|..|.:|:|::
 Worm   452 KFGVGSGFAVIYIFAGELYPTVVRAIGMGMSSM-VAG-SGLLLAPHIVNLGKIVKILPLLIMGLM 514

  Fly   488 FFAGSFVCLLLPETLNRSLPTTIEEGEVFGK 518
            ..:...:...|||||...||.|||:.|.|||
 Worm   515 ALSAGILTFFLPETLGAPLPMTIEDAENFGK 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6231NP_001262734.1 2A0119 11..509 CDD:273328 142/531 (27%)
MFS 125..499 CDD:119392 104/387 (27%)
oct-1NP_492617.4 2A0119 34..536 CDD:273328 142/531 (27%)
MFS 134..526 CDD:119392 112/412 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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