DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6231 and sv2b

DIOPT Version :9

Sequence 1:NP_001262734.1 Gene:CG6231 / 42339 FlyBaseID:FBgn0038720 Length:585 Species:Drosophila melanogaster
Sequence 2:XP_002933355.1 Gene:sv2b / 100497731 XenbaseID:XB-GENE-6041859 Length:711 Species:Xenopus tropicalis


Alignment Length:574 Identity:114/574 - (19%)
Similarity:189/574 - (32%) Gaps:200/574 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 GYRSMNTELNWVCDSAYKARIGQSLFFIGSVVGTLFYGLLSDKIGRVPALILSNFCGFAGDFSTI 166
            |:...:.|.:.....:.|..:| .:.::|.::|...:|.|:||:||...||:|.....|..|.:.
 Frog   158 GFVLPSAEKDMCLSRSNKGMLG-LIVYLGMMLGAFVWGGLADKVGRKKCLIISLTINAAFSFVSS 221

  Fly   167 FTKSVATFTLCRFISGLAADTNFYLMYIIVLEYIRPSMRTLGLNMAVGLFYCLGLVFTPWLA-VL 230
            |.:....|..||.|||.....:..:::....|::....|...|:. :.:|:.:|.|:...:| .:
 Frog   222 FVQGYGLFLFCRLISGFGIGGSLPIVFAYFSEFLAREKRGEHLSW-LCMFWMIGAVYAAAMAWSI 285

  Fly   231 VGH---------------WQIYLACTSLPILLVVLYYFVVQESAQWLVTRNDIDGAIVRLKRV-- 278
            :.|               |::::....||.:..::....:.||.::|:.....|.|.:.||.:  
 Frog   286 IPHYGWGFSMGTHYHFHSWRVFVVICVLPCIASIIALKFMPESPRFLLETGKHDEAWMILKNIHD 350

  Fly   279 ----AKFNGCRV---------SQAD-FDE--------FRR-----------------HCQMTHEM 304
                ||....:|         .|.| |.|        |:|                 ||      
 Frog   351 TNMRAKGEPEKVFTVSHIKTPKQPDEFIEIQSSTGTWFQRWFVRIMTVIKQIWENMLHC------ 409

  Fly   305 LGGDDKKQATLL-------------------DMFR--------------TPRMRKNTLILF---- 332
            ..|..:|....|                   |..|              |....||....|    
 Frog   410 FSGQFRKNTIFLAVVWFTMSLSYYGLTVWFPDTIRYLQDEDYASKVKRFTDENVKNFNFNFTLEN 474

  Fly   333 ----------------------FKSMVITLCY--DAVSR-------------------------- 347
                                  ||..:...||  |..|.                          
 Frog   475 QIHEDGEYYNDRFYKMKLKYVTFKDSLFDECYFEDVTSTGSIFENCTIQNTVFYNTDLYQHKFID 539

  Fly   348 ----NV------EGMGI-----SPFIMFSLS---ALAVLPSSVLLVLLQDRIGRKGMASGSLLVG 394
                ||      ||..|     :.|:::.:|   :|:|||.:::..||.|:|||..|.:||:|:.
 Frog   540 CNFINVTFSQPKEGCHIDFEEDNDFLIYLVSFLGSLSVLPGNIISALLMDKIGRIRMIAGSMLIS 604

  Fly   395 GL------FTAAAGIAIAYQQHNHNAILLACLTIAARFGVAISYESGSQYAT-ELIPTCVRGQGV 452
            .:      |..:....|.:|          ||..    |.:|:..:.....| ||.||..|....
 Frog   605 AVCCFFLFFGNSESAMIGWQ----------CLFC----GTSIAAWNALDVVTVELYPTNKRATAF 655

  Fly   453 AAVH-----VAGFAASFLAPYILWLGTFFKAAPSIILGVLFFAGSFVCLLLPET 501
            ..::     .|.|..|..|.::    ...|..|.::.......|..:.|.||||
 Frog   656 GILNGLCKLAAIFGNSIFASFV----GITKVIPILLASTALVGGGLISLRLPET 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6231NP_001262734.1 2A0119 11..509 CDD:273328 114/574 (20%)
MFS 125..499 CDD:119392 106/547 (19%)
sv2bXP_002933355.1 synapt_SV2 1..711 CDD:130366 114/574 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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