DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17752 and mdtM

DIOPT Version :10

Sequence 1:NP_650817.1 Gene:CG17752 / 42337 FlyBaseID:FBgn0038718 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_418757.1 Gene:mdtM / 948861 ECOCYCID:EG12576 Length:410 Species:Escherichia coli


Alignment Length:325 Identity:63/325 - (19%)
Similarity:108/325 - (33%) Gaps:90/325 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 SFFFIGSALGSIFFGYLADRIGRLPACVLSTLTGASGDFFTSFVGSLPMFSFTRFISGLSMDTQY 180
            |.:..|........|.|:|||||.|..:...|........|.|..|:..|...|.|.|.|     
E. coli    55 SLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATMFTTSMTQFLIARAIQGTS----- 114

  Fly   181 VLMYILVFEYLSPQH---RTFGLNIILGVFYSIGLMISPWIAIWLG-------NWRSYLWAASLP 235
             :.:|....|::.|.   :|.|:. ::.:..|| ::|:|.|....|       :|:  :..|.:.
E. coli   115 -ICFIATVGYVTVQEAFGQTKGIK-LMAIITSI-VLIAPIIGPLSGAALMHFMHWK--VLFAIIA 174

  Fly   236 ALGMLIF---------------------------------PLFLHES----------VEW----- 252
            .:|.:.|                                 .|||..:          :.|     
E. coli   175 VMGFISFVGLLLAMPETVKRGAVPFSAKSVLRDFRNVFCNRLFLFGAATISLSYIPMMSWVAVSP 239

  Fly   253 --LLTKGKFDKAVNNLKSVAKFNGRQVEDSVFDEFIKHYREKLNSAQKKSSDTFMGMLRTPRLRK 315
              |:..|....:......|..|....|.:::...|:|...|                   ||...
E. coli   240 VILIDAGSLTTSQFAWTQVPVFGAVIVANAIVARFVKDPTE-------------------PRFIW 285

  Fly   316 FTIILLIKSMIITIAFDILSRNVEGVGISPFKLFSYSGFVVLPGGLSIILFQNKIGRKGMACASL 380
            ..:.:.:..:.:.|..::||.:|....:....|:::...::.|......||.||: .||...|||
E. coli   286 RAVPIQLVGLSLLIVGNLLSPHVWLWSVLGTSLYAFGIGLIFPTLFRFTLFSNKL-PKGTVSASL 349

  Fly   381  380
            E. coli   350  349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17752NP_650817.1 2A0119 11..498 CDD:273328 63/325 (19%)
mdtMNP_418757.1 PRK15403 1..410 CDD:237958 63/325 (19%)

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