DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17752 and ygcS

DIOPT Version :10

Sequence 1:NP_650817.1 Gene:CG17752 / 42337 FlyBaseID:FBgn0038718 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_417251.2 Gene:ygcS / 947238 ECOCYCID:G7437 Length:445 Species:Escherichia coli


Alignment Length:398 Identity:97/398 - (24%)
Similarity:166/398 - (41%) Gaps:55/398 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 IGSALGSIFFGYLADRIGRLPACVLSTLTGASGDFFTSFVGSLPMFSFTRFISGLSMDTQYVLMY 184
            :|..|||:..|:::|.|||......|.|......|...|..:.......|.:.|:.:...|.:.:
E. coli    65 LGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGH 129

  Fly   185 ILVFEYLSPQHRTFGLNIILGVF---YSIGLMISP-----WIAIWLGNWRSYLWAASLPALGMLI 241
            .|:.|:...:||    .|:||.|   :::|.:::.     :|:.....||..|.:|:||||.:.:
E. coli   130 TLLAEFSPRRHR----GILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITL 190

  Fly   242 FPLFLHESVEWLLTKGKFDKAVNNLKSVAKFNGRQV--EDSVFDEFIKHYREKLNSAQKKSSDTF 304
            ......||..|||.:|:|.:|   ...|.::.|..|  .|.|.....||.:...:|...:     
E. coli   191 LRWGTPESPRWLLRQGRFAEA---HAIVHRYFGPHVLLGDEVVTATHKHIKTLFSSRYWR----- 247

  Fly   305 MGMLRTPRLRKFTIILLIKSMII-----TIAFDILSRNVEGVGISPFKLFS--YSGFVVLPGGLS 362
                ||.....|.:.|:|...:|     |||        :.:|:......|  .:..:::...|.
E. coli   248 ----RTAFNSVFFVCLVIPWFVIYTWLPTIA--------QTIGLEDALTASLMLNALLIVGALLG 300

  Fly   363 IILFQNKIGRKGMACASLLVGAF-ITATTGYLVGTLDPANYSVLLGFMVCLARFGAVVAYDAEAQ 426
            ::|......||      .|:|:| :.|.|..::..|...:...||.|::......||  .:....
E. coli   301 LVLTHLLAHRK------FLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAV--SNLVGI 357

  Fly   427 YAAEIIPTSVRGRGVANIHVVGNAFAFFSSYII--YLGTFYKPLPSLLISFLLIIGACLC-LTLP 488
            ..||..||.:|..||.....:....|..|:.::  .|..:...:..||::.:|::|..:. |..|
E. coli   358 LPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLWAP 422

  Fly   489 ETLHKQLP 496
            ||  |.||
E. coli   423 ET--KALP 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17752NP_650817.1 2A0119 11..498 CDD:273328 97/398 (24%)
ygcSNP_417251.2 MFS_SV2_like 23..419 CDD:340874 90/385 (23%)

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