DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17752 and shiA

DIOPT Version :10

Sequence 1:NP_650817.1 Gene:CG17752 / 42337 FlyBaseID:FBgn0038718 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_416488.1 Gene:shiA / 946495 ECOCYCID:G7067 Length:438 Species:Escherichia coli


Alignment Length:436 Identity:98/436 - (22%)
Similarity:170/436 - (38%) Gaps:129/436 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 GQSFFFIGSALGSIFFGYLADRIGRLPACVLST-LTGASGDFFTSFVGSLPMFS----------- 166
            |..|.|  ..||.:.||:..||:||....:|:. :.|.:    |:.:|.||.||           
E. coli    71 GVGFLF--RPLGGVIFGHFGDRLGRKRMLMLTVWMMGIA----TALIGILPSFSTIGWWAPILLV 129

  Fly   167 FTRFISGLSMDTQYVLMYILVFEYLSPQHRTFGLNIILGVFYSIGLMIS----PWIAIWLGNWRS 227
            ..|.|.|.::..::....:|..| .:|:::....:..:.|.|.:||::|    ..|::...:.:.
E. coli   130 TLRAIQGFAVGGEWGGAALLSVE-SAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQF 193

  Fly   228 YLWAASLPALGMLIFPLFLHESVEWLLTKGKFDKAVNNLKSVAKFNGRQVEDSVFDEFIKHYREK 292
            ..|...:|    .:|.:.|.....|:.         |.::..|:|..:|           ||:  
E. coli   194 LSWGWRIP----FLFSIVLVLGALWVR---------NGMEESAEFEQQQ-----------HYQ-- 232

  Fly   293 LNSAQKKSSDTFMGMLRTPRLRKFTIILLIK-----SMIITIAFDILSRNVEGVGISPFKLFSYS 352
              :|.||.......:||.|  ..|..|:.::     :|.|..|| .|:.:.:.:|: |.:||...
E. coli   233 --AAAKKRIPVIEALLRHP--GAFLKIIALRLCELLTMYIVTAF-ALNYSTQNMGL-PRELFLNI 291

  Fly   353 GFVVLPGGLSIIL------FQNKIGRKGMACASLLVGAFITATTGYLVGTLDP------------ 399
            |.:|  ||||.:.      ..::.||:.:         :||.|   |:|||..            
E. coli   292 GLLV--GGLSCLTIPCFAWLADRFGRRRV---------YITGT---LIGTLSAFPFFMALEAQSI 342

  Fly   400 ---ANYSVLLG-----FMVCLAR------FGAVVAYDAEAQYAAEIIPTSVRGRGVANIHVVGNA 450
               ..:|::|.     .:||:.:      |||...|             |..|.|.....|||..
E. coli   343 FWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRY-------------SGAGVGYQVASVVGGG 394

  Fly   451 FA-FFSSYII--YLGTFYKPLPSLLISFLLIIGACLCLTLPETLHK 493
            |. |.::.:|  :.|.::.      ::..|:.| ||...:...|.|
E. coli   395 FTPFIAAALITYFAGNWHS------VAIYLLAG-CLISAMTALLMK 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17752NP_650817.1 2A0119 11..498 CDD:273328 98/436 (22%)
shiANP_416488.1 PRK09952 1..438 CDD:182163 98/436 (22%)

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