DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17752 and SV2C

DIOPT Version :10

Sequence 1:NP_650817.1 Gene:CG17752 / 42337 FlyBaseID:FBgn0038718 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_055794.3 Gene:SV2C / 22987 HGNCID:30670 Length:727 Species:Homo sapiens


Alignment Length:548 Identity:114/548 - (20%)
Similarity:188/548 - (34%) Gaps:194/548 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 SFFFIGSALGSIFFGYLADRIGRLPACVLSTLTGASGDFFTSFVGSLPMFSFTRFISGLSMDTQY 180
            |..::|..:|:.|:|.|||::||..:.::.........|.:|||.....|.|.|.:||..:....
Human   195 SIVYLGMMVGAFFWGGLADKVGRKQSLLICMSVNGFFAFLSSFVQGYGFFLFCRLLSGFGIGGAI 259

  Fly   181 VLMYILVFEYLSPQHRTFGLNIILGVFYSIGLMIS---PWIAI----W---LG------NWRSYL 229
            ..::....|.|:.:.|...|: .|.:|:.||.:.:   .|..|    |   :|      :||.::
Human   260 PTVFSYFAEVLAREKRGEHLS-WLCMFWMIGGIYASAMAWAIIPHYGWSFSMGSAYQFHSWRVFV 323

  Fly   230 WAASLPALGMLIFPLFLHESVEWLLTKGKFDKAVNNLKSVAKFN--GRQVEDSVF---------- 282
            ...:||.:..::...|:.||..:||..||.|:|...||.:...|  .|...:.||          
Human   324 IVCALPCVSSVVALTFMPESPRFLLEVGKHDEAWMILKLIHDTNMRARGQPEKVFTVNKIKTPKQ 388

  Fly   283 -DEFIK-------HYRE---KLNSAQKKSSDTFMGMLRTPRLRKFTIILLIKSMIITIAFD---- 332
             ||.|:       .||.   ::.:.......|||.....| :|..||.|.|  :..|::|.    
Human   389 IDELIEIESDTGTWYRRCFVRIRTELYGIWLTFMRCFNYP-VRDNTIKLTI--VWFTLSFGYYGL 450

  Fly   333 -----------------ILSRNVEG---------------------------VGI---------- 343
                             :|:||||.                           :|:          
Human   451 SVWFPDVIKPLQSDEYALLTRNVERDKYANFTINFTMENQIHTGMEYDNGRFIGVKFKSVTFKDS 515

  Fly   344 --------------------------------SPFKLF----------------------SYSGF 354
                                            .|:|..                      .||.:
Human   516 VFKSCTFEDVTSVNTYFKNCTFIDTVFDNTDFEPYKFIDSEFKNCSFFHNKTGCQITFDDDYSAY 580

  Fly   355 -----------VVLPGGLSIILFQNKIGR----------KGMACASLLVGAFITATTGYLVGTLD 398
                       .||||.:...|..::|||          .|::|..|..|               
Human   581 WIYFVNFLGTLAVLPGNIVSALLMDRIGRLTMLGGSMVLSGISCFFLWFG--------------- 630

  Fly   399 PANYSVLLGFMVCLARFGAVVAYDAEAQYAAEIIPTSVRGRGVANIHVVGNAFAFFSSYII-YLG 462
             .:.|:::| |:||.....:.|:::......|:.||..|..|...::.:..|.|...:.|. .|.
Human   631 -TSESMMIG-MLCLYNGLTISAWNSLDVVTVELYPTDRRATGFGFLNALCKAAAVLGNLIFGSLV 693

  Fly   463 TFYKPLPSLLISFLLIIGACLCLTLPET 490
            :..|.:|.||.|.:|:.|..:.|.||:|
Human   694 SITKSIPILLASTVLVCGGLVGLCLPDT 721

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17752NP_650817.1 2A0119 11..498 CDD:273328 114/548 (21%)
SV2CNP_055794.3 synapt_SV2 1..727 CDD:130366 114/548 (21%)
Interaction with SYT1. /evidence=ECO:0000250 1..57
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 24..84
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 109..128
(Microbial infection) C.botulinum neurotoxin type A-binding. /evidence=ECO:0000269|PubMed:27294781 519..563 2/43 (5%)
Blue background indicates that the domain is not in the aligned region.

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