DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17751 and Slc22a1

DIOPT Version :9

Sequence 1:NP_650816.3 Gene:CG17751 / 42336 FlyBaseID:FBgn0038717 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_036829.1 Gene:Slc22a1 / 24904 RGDID:3224 Length:556 Species:Rattus norvegicus


Alignment Length:584 Identity:144/584 - (24%)
Similarity:244/584 - (41%) Gaps:94/584 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LQSVLEKCGNFGPYQ---ILLLGLFGYTNIVSSLH--YFSQTIISFTPSHRCSRP---------- 52
            :..|||:.|.||.:|   .|||.|     |.:||.  |.....:.|||.|.|..|          
  Rat     4 VDDVLEQVGEFGWFQKQAFLLLCL-----ISASLAPIYVGIVFLGFTPGHYCQNPGVAELSQRCG 63

  Fly    53 ----EDYQ-------PNSTSLLSCSVMQFDKEFK-----CT--------------------SWDF 81
                |:..       |:..:......|:::.::.     |.                    .|.:
  Rat    64 WSQAEELNYTVPGLGPSDEASFLSQCMRYEVDWNQSTLDCVDPLSSLVANRSQLPLGPCEHGWVY 128

  Fly    82 ERESNYESITTELEWVCDDAYKLAVGQSFFFIGSALGSIFFGYLADRIGRLPACVLSTLTGASGD 146
            :...:  ||.||...||.||:|:.:.||...:|..|||:..||:|||.||....:::||..:...
  Rat   129 DTPGS--SIVTEFNLVCGDAWKVDLFQSCVNLGFFLGSLVVGYIADRFGRKLCLLVTTLVTSVSG 191

  Fly   147 FFTSFVGSLPWFSFTRFISGLFMDTQYVLMYILVFEYL-SPQHRTFGLNIILGVFYCVGLMISPW 210
            ..|:...........|.:.|:.....:|..|.|:.|:: |...||..  |:..:.:.|||:....
  Rat   192 VLTAVAPDYTSMLLFRLLQGMVSKGSWVSGYTLITEFVGSGYRRTTA--ILYQMAFTVGLVGLAG 254

  Fly   211 IAIWVTNWRNYLWAASLPALGMLLFPVFLHESAEWLLTKGKFEKAEKSLRGVAKFNGRQVDDSVF 275
            :|..:.:||....|.|||....||:..|:.||..|||::.:..:|.:.:..:|:.||:.....: 
  Rat   255 VAYAIPDWRWLQLAVSLPTFLFLLYYWFVPESPRWLLSQKRTTRAVRIMEQIAQKNGKVPPADL- 318

  Fly   276 DEFIKHYREKL----NNSQNKSSDTFMGMLRTPRLRKFTIILLIKSMIITIAFDILSRNVEGVGI 336
                     |:    .::..|.|.:|..:.|||.|||.|:||:.......:.:..|..:|...|.
  Rat   319 ---------KMLCLEEDASEKRSPSFADLFRTPNLRKHTVILMYLWFSCAVLYQGLIMHVGATGA 374

  Fly   337 SPFKLFSYSGFCYLPAGLTIILFQNKIGR-KGMACASLFVGAIITAATGYLVATLDPSDYSVLLG 400
            :.:..|.||.....||...|::..::||| ..:|.::|..||      ..|:....|.:...|..
  Rat   375 NLYLDFFYSSLVEFPAAFIILVTIDRIGRIYPIAASNLVTGA------ACLLMIFIPHELHWLNV 433

  Fly   401 FMVSLGRYGAVVAYDAEAQYAAEIIPTSVKGRGVANIHVVGNAFAFFSSYIIY-LGTFYKPLPSL 464
            .:..|||.||.:.........||:.||.::..|:.....:.:....|:.:::: |...::.||.:
  Rat   434 TLACLGRMGATIVLQMVCLVNAELYPTFIRNLGMMVCSALCDLGGIFTPFMVFRLMEVWQALPLI 498

  Fly   465 MISFILLIGACLCLALPETLHKNLPQNLEEGEMFAKGEKWYFFPCFSRRPKTQKSATQLESSDG 528
            :...:.|....:.|.||||....||:.:||.|...:           |:.|.:::...|:...|
  Rat   499 LFGVLGLTAGAMTLLLPETKGVALPETIEEAENLGR-----------RKSKAKENTIYLQVQTG 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17751NP_650816.3 2A0119 11..490 CDD:273328 133/536 (25%)
MFS 109..481 CDD:119392 95/378 (25%)
Slc22a1NP_036829.1 2A0119 12..525 CDD:273328 134/537 (25%)
MFS 125..515 CDD:119392 106/409 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347312
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X24
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.950

Return to query results.
Submit another query.