DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17751 and Sv2a

DIOPT Version :10

Sequence 1:NP_650816.3 Gene:CG17751 / 42336 FlyBaseID:FBgn0038717 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_476558.2 Gene:Sv2a / 117559 RGDID:619715 Length:742 Species:Rattus norvegicus


Alignment Length:676 Identity:126/676 - (18%)
Similarity:205/676 - (30%) Gaps:288/676 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QSVLEKCGNFGPYQILLLGLFGYTNIVSSLHYFSQTIISFT-PSHRCSRPEDYQPNSTSLLSCSV 67
            :::|.:||: |.:|..|..:.|...:...:..|   ::.|. ||                     
  Rat   153 ETILRECGH-GRFQWTLYFVLGLALMADGVEVF---VVGFVLPS--------------------- 192

  Fly    68 MQFDKEFKCTSWDFERESNYESITTELEWVCDDAYKLAVGQSFFFIGSALGSIFFGYLADRIGRL 132
                                    .|.:....|:.|..:| ...::|..:|:..:|.||||:||.
  Rat   193 ------------------------AEKDMCLSDSNKGMLG-LIVYLGMMVGAFLWGGLADRLGRR 232

  Fly   133 PACVLSTLTGASGDFFTSFVGSLPWFSFTRFISGLFMDTQYVLMYILVFEYLSPQHRTFGLNIIL 197
            ...::|....:...||:|||.....|.|.|.:||:.:.....:::....|:|:.:.|...|: .|
  Rat   233 QCLLISLSVNSVFAFFSSFVQGYGTFLFCRLLSGVGIGGSIPIVFSYFSEFLAQEKRGEHLS-WL 296

  Fly   198 GVFYCVGLMIS---PWIAI----W---------VTNWRNYLWAASLP---ALGMLLFPVFLHESA 243
            .:|:.:|.:.:   .|..|    |         ..:||.::...:.|   |:|.|   ....||.
  Rat   297 CMFWMIGGVYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVLVCAFPSVFAIGAL---TTQPESP 358

  Fly   244 EWLLTKGKFEKAEKSLRGVAKFNGRQV--DDSVFD-EFIK--HYREKLNNSQNKSSDT------- 296
            .:.|..||.::|...|:.|...|.|..  .:.||. ..||  |..::|...|   |||       
  Rat   359 RFFLENGKHDEAWMVLKQVHDTNMRAKGHPERVFSVTHIKTIHQEDELIEIQ---SDTGTWYQRW 420

  Fly   297 --------------FMGMLRTPRLRKFTIILL----------------IKSMI------------ 319
                          |:... :|..|:.|::::                ...||            
  Rat   421 GVRALSLGGQVWGNFLSCF-SPEYRRITLMMMGVWFTMSFSYYGLTVWFPDMIRHLQAVDYAART 484

  Fly   320 ----------ITIAF--------------------------------------DILSRN------ 330
                      :|..|                                      |:.|.|      
  Rat   485 KVFPGERVEHVTFNFTLENQIHRGGQYFNDKFIGLRLKSVSFEDSLFEECYFEDVTSSNTFFRNC 549

  Fly   331 -------------------------------------VEGVGISPFKLF--SYSG-FCYLPAGLT 355
                                                 |.|.|...:.::  |:.| ...||..:.
  Rat   550 TFINTVFYNTDLFEYKFVNSRLVNSTFLHNKEGCPLDVTGTGEGAYMVYFVSFLGTLAVLPGNIV 614

  Fly   356 IILFQNKIGRKGM-------ACAS------------------LFVGAIITA--ATGYLVATLDPS 393
            ..|..:||||..|       :|.|                  ||.|..|.:  |...|...|.||
  Rat   615 SALLMDKIGRLRMLAGSSVLSCVSCFFLSFGNSESAMIALLCLFGGVSIASWNALDVLTVELYPS 679

  Fly   394 D-YSVLLGFMVSLGRYGAVVAYDAEAQYAAEIIPTSVKGRGVANIHVVGNAFAFFSSYIIYLGTF 457
            | .:...||:.:|.:..||:                              ..:.|:|::    ..
  Rat   680 DKRTTAFGFLNALCKLAAVL------------------------------GISIFTSFV----GI 710

  Fly   458 YKPLPSLMISFILLIGACLCLALPET 483
            .|..|.|..|..|.:|:.|.|.||||
  Rat   711 TKAAPILFASAALALGSSLALKLPET 736

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17751NP_650816.3 2A0119 11..490 CDD:273328 124/669 (19%)
Sv2aNP_476558.2 synapt_SV2 1..742 CDD:130366 126/676 (19%)
Interaction with SYT1 1..57
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..145
Blue background indicates that the domain is not in the aligned region.

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