DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17751 and slc22a20p.1

DIOPT Version :9

Sequence 1:NP_650816.3 Gene:CG17751 / 42336 FlyBaseID:FBgn0038717 Length:533 Species:Drosophila melanogaster
Sequence 2:XP_004913725.1 Gene:slc22a20p.1 / 100489586 XenbaseID:XB-GENE-6463910 Length:572 Species:Xenopus tropicalis


Alignment Length:580 Identity:134/580 - (23%)
Similarity:235/580 - (40%) Gaps:76/580 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDLQSVLEKCGNFGPYQILLLGLFGYTNIVSSLHYFSQTIISFTPSHRCSRP----------EDY 55
            |....:|...|..|.:||:...:.....:....|.|.|...:..|:|||..|          :|:
 Frog     1 MGFNDLLLSVGGLGRFQIIHTTMLLIPMLFMGCHNFLQNFSAAVPAHRCWVPSLDNNTMGYDQDH 65

  Fly    56 QP------NSTSLLSCSVMQFDKEF--------------KC-TSWDFERESNYESITTELEWVCD 99
            .|      .|...|||  :::.|..              .| ..|.:::.....:|.||.:.||.
 Frog    66 LPAFIPMDESEKPLSC--LRYRKALHSMWTNGTSTNHTEPCEDGWVYDKSDFSSTIVTEWDLVCK 128

  Fly   100 DAYKLAVGQSFFFIGSALGSIFFGYLADRIGRLPACVLSTLT----GASGDFFTSFVGSLPWFSF 160
            ......:.||.:..|..:|::..|.|:||:||....:.|.|.    |....|..:|:      ::
 Frog   129 LRKMRQIAQSIYMAGVLVGAVLLGGLSDRLGRRALLIGSNLVMAVCGTCAAFLPNFI------TY 187

  Fly   161 TRF-------ISGLFMDTQYVLMYILVFEYLSPQHRTFGLNIILGVFYCVGLMISPWIAIWVTNW 218
            ..|       .||:.::|.     .|:.|:..|:.||....:....|.| |.::...:|..:..|
 Frog   188 CTFRCLCGIAFSGITLNTN-----SLILEWTPPKGRTIMGTLFAAGFTC-GQILLAALAYGIREW 246

  Fly   219 RNYLWAASLPALGMLLFPVFLHESAEWLLTKGKFEKAEKSLRGVAKFNGRQVDDSVFDE--FIKH 281
            |...:|.|.|.....|:...:.|||.||:.||:..:|.|:|:.||..||::.:.....|  .|.|
 Frog   247 RWLQFAVSAPFYFFFLYSWLVPESARWLILKGRSHEALKALQRVAIINGKREEGQKLSEMILISH 311

  Fly   282 YREKLNNSQNKSSDTFMGMLRTPRLRKFTIILLIKSMIITIAFDILSRNVEGVGISPFKLFSYSG 346
            .:.:||  |.|...:...:.|||.:||.||.|::......:||..|..:::..|||.|.|....|
 Frog   312 MQSELN--QVKRPHSLFDLFRTPGMRKVTICLMMVWFSSGVAFYGLGMDLQNFGISIFLLQFTFG 374

  Fly   347 FCYLPAGLTIILFQNKIGRKGMACASLFVGAIITAATGYLVATLDPSDYSVLLGFMVSLGRYGAV 411
            ...:||.:...|....:||:......|.:..:......::     |....:|...:...|:....
 Frog   375 AIDMPAKVVAALLMTYMGRRVTQATVLILSGVALLTNAFI-----PQGMKILRMVLAVFGKGCMA 434

  Fly   412 VAYDAEAQYAAEIIPTSVKGRGVANIHVVGNAFAFFSSYIIYLGTFYKPLPSLMISFILLIGACL 476
            .::.....::.|:.||.::..|:..:.::....:..:..::.|......|||.:.....:|....
 Frog   435 ASFACAYLFSGELFPTVIRQTGMGVVAMMARVGSVVAPLVLLLWEISPILPSAIYGIAAIIAGGA 499

  Fly   477 CLALPETLHKNLPQNLEEGEMFAKG---------EKWYFFPCFSRR--PKTQKSATQLES 525
            ...|.||.::.||:::||.|..::|         |:.....|.|:.  ||.:....|.:|
 Frog   500 ATFLMETNNQQLPESVEEVEARSQGKHTLKKVLKEEVPLNQCESQNMAPKEEMPLNQSQS 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17751NP_650816.3 2A0119 11..490 CDD:273328 120/522 (23%)
MFS 109..481 CDD:119392 89/384 (23%)
slc22a20p.1XP_004913725.1 MFS 101..485 CDD:391944 93/402 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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