DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7342 and SV2A

DIOPT Version :9

Sequence 1:NP_001247196.1 Gene:CG7342 / 42335 FlyBaseID:FBgn0038716 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_001315603.1 Gene:SV2A / 9900 HGNCID:20566 Length:742 Species:Homo sapiens


Alignment Length:580 Identity:115/580 - (19%)
Similarity:201/580 - (34%) Gaps:201/580 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 MGYQSFPSEMDWVCADAWKLTLGQSMFFVGSVVGSMVLGYLADVVGRLPILIVA----NLIAMTG 148
            :|:....:|.|...:|:.|..|| .:.::|.:||:.:.|.|||.:||...|:::    ::.|...
Human   186 VGFVLPSAEKDMCLSDSNKGMLG-LIVYLGMMVGAFLWGGLADRLGRRQCLLISLSVNSVFAFFS 249

  Fly   149 NLLTIWSTNVTLFCMFRMISGIATDSNFVMMYILVMEYMRPSVRTLGLS-ICIGFFYCLGSM--- 209
            :.:..:.|  .|||  |::||:....:..:::....|::....|...|| :|:  |:.:|.:   
Human   250 SFVQGYGT--FLFC--RLLSGVGIGGSIPIVFSYFSEFLAQEKRGEHLSWLCM--FWMIGGVYAA 308

  Fly   210 AAPWI-------------AVLMRSWRGFLLTTSLPLLVVPFFYLIVPESIQWLISKQKYDSAVVC 261
            |..|.             |....|||.|:|..:.|.:.........|||.::.:...|:|.|.:.
Human   309 AMAWAIIPHYGWSFQMGSAYQFHSWRVFVLVCAFPSVFAIGALTTQPESPRFFLENGKHDEAWMV 373

  Fly   262 LKRVAKINGR-----------------HVEESAYAEFIE-ECKCSQQNQKASPHLLDL------- 301
            ||:|...|.|                 |.|:    |.|| :.......|:.....|.|       
Human   374 LKQVHDTNMRAKGHPERVFSVTHIKTIHQED----ELIEIQSDTGTWYQRWGVRALSLGGQVWGN 434

  Fly   302 FQT---PRLRRHTLIL----------------FFKSMV--------------------------I 321
            |.:   |..||.||::                :|..|:                          .
Human   435 FLSCFGPEYRRITLMMMGVWFTMSFSYYGLTVWFPDMIRHLQAVDYASRTKVFPGERVEHVTFNF 499

  Fly   322 TL--------------------------------CY--DAVSRN--------------------- 331
            ||                                ||  |..|.|                     
Human   500 TLENQIHRGGQYFNDKFIGLRLKSVSFEDSLFEECYFEDVTSSNTFFRNCTFINTVFYNTDLFEY 564

  Fly   332 ----------------------VQGLGISPFVMFSLS---ATAILPACLLIIALQDRIGRKAMAS 371
                                  |.|.|...::::.:|   ..|:||..::...|.|:|||..|.:
Human   565 KFVNSRLINSTFLHNKEGCPLDVTGTGEGAYMVYFVSFLGTLAVLPGNIVSALLMDKIGRLRMLA 629

  Fly   372 ASLLLSGIFISVTGGIIFAASASDKTTTLLVSLSVVGRFGVTVA-YNSGAQYATELIPTCVRGQG 435
            .|.::|.:       ..|..|..:..:.::..|.:.|  ||::| :|:......||.|:..|...
Human   630 GSSVMSCV-------SCFFLSFGNSESAMIALLCLFG--GVSIASWNALDVLTVELYPSDKRTTA 685

  Fly   436 VAAVH-----VAGYAFTFFSAYILFTRSVFSPLPEIILGVLSLLGACLCLLLPETLHRTL 490
            ...::     .|....:.|::::..|::.    |.:.......||:.|.|.||||..:.|
Human   686 FGFLNALCKLAAVLGISIFTSFVGITKAA----PILFASAALALGSSLALKLPETRGQVL 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7342NP_001247196.1 2A0119 12..491 CDD:273328 115/580 (20%)
MFS 93..>243 CDD:119392 40/170 (24%)
SV2ANP_001315603.1 synapt_SV2 1..742 CDD:130366 115/580 (20%)
Interaction with SYT1. /evidence=ECO:0000250 1..57
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 33..144
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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