DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7342 and OCT2

DIOPT Version :9

Sequence 1:NP_001247196.1 Gene:CG7342 / 42335 FlyBaseID:FBgn0038716 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_178054.1 Gene:OCT2 / 844274 AraportID:AT1G79360 Length:527 Species:Arabidopsis thaliana


Alignment Length:529 Identity:138/529 - (26%)
Similarity:225/529 - (42%) Gaps:73/529 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DKILEKCGDFSRLQMIMLLLFCVINVLSALHYYSQTIISFV----PKYWCADGLPASIESPVDSS 65
            |.|....|.|...|.:...|.....|..|    .||.||..    |.:.|.|......|| :.:.
plant    22 DTIESYIGSFGWAQFLQAALVSFSGVFDA----QQTFISVFTDSEPTWHCTDSNSICHES-ISNI 81

  Fly    66 CLPLNRNISTPNTCYSYNYELYMGYQSFPSEMDWVCADAWKLTLGQSMFFVGSVVGSMVLGYLAD 130
            |:       .|.|.:|::|..::   |..||....||.::...|.:|.||||.::|.:||..|||
plant    82 CI-------LPKTAWSWDYSPHV---SVISEWGLQCAGSFVKGLPESSFFVGCLIGGLVLSTLAD 136

  Fly   131 -VVGRLPILIVANLIAMTGNLLTIWSTNVTLFCMFRMISGIATDSNFVMMYILVMEYMRPSVR-T 193
             .:||..:|.::.|:.....:||::|.|:.::.:.|.::|....:......:|..|.:....| .
plant   137 SSLGRKNMLFLSCLVMAISTMLTVFSPNIWVYAVLRFVNGFGRATIGTCALVLSTELVGKKWRGR 201

  Fly   194 LGLSICIGFFYCLGSMAAPWIAVLMR--SWRGFLLTTSLPLLV----VPFFYLIVPESIQWLISK 252
            :|:....||.  ||.::.|.:|.:.|  |||.....||:|.::    |.||   |.||.:||..:
plant   202 VGIMSFFGFM--LGFLSLPLMAYMNRGSSWRILYAWTSIPTIIYCVLVRFF---VCESPRWLFVR 261

  Fly   253 QKYDSAVVCLKRVAKINGRHVEE-SAYAEFIEECKCSQQNQKASPHLLDLFQTPR--------LR 308
            .:.:.|:..|||||.|....|.. .|.:.........:..:|.|.: :::|.|.:        |:
plant   262 GRREEAISILKRVASIPSTDVSSGGAISMSFSSLPFEEDEEKPSTN-VNIFTTMKVLVEKRWALK 325

  Fly   309 RHTLILFFKSMVITLCYDAVSRNVQGLGISPFVMFSLSATAILPACLLIIALQDRIGRKAMASAS 373
            |.:.::.. :..|.|.|..:...:..|..:.::..:.:|...|||.|:.:.|.|::.|:......
plant   326 RLSAVMAI-AFGIGLVYYGMPLALSNLDFNIYLSAAFNALMDLPANLITLFLVDKLSRRNALIGF 389

  Fly   374 LLLSGIFISVTGGIIFAA--SASDKTTTLLVSLSVVGRFGVTVAYNSGAQYATELIPTCVRGQGV 436
            ..|.|    |:..:|||.  ........|.::|.::..|....|:|....|..||.|||||...:
plant   390 TALGG----VSSVLIFALHNMRIGNHGALQLALELISYFSACSAFNMEMIYTIELFPTCVRNSAI 450

  Fly   437 AAVHVAGYAFTFFSAYILFTRSVFSPLPEIILG------VLSLLGACLCLL------LPETLHRT 489
            |....|           |....||||: .:..|      ...|.|..:.||      ||||....
plant   451 AMARQA-----------LVLGGVFSPI-MVAAGRKNAFWSFGLFGLAIGLLGLFAVGLPETRGSD 503

  Fly   490 LPTSLEDGE 498
            |..::::.|
plant   504 LCDTMDEEE 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7342NP_001247196.1 2A0119 12..491 CDD:273328 134/513 (26%)
MFS 93..>243 CDD:119392 46/157 (29%)
OCT2NP_178054.1 MFS_OCT_plant 79..497 CDD:340936 115/450 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X24
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.020

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