DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7342 and Sv2b

DIOPT Version :9

Sequence 1:NP_001247196.1 Gene:CG7342 / 42335 FlyBaseID:FBgn0038716 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_001103223.1 Gene:Sv2b / 64176 MGIID:1927338 Length:683 Species:Mus musculus


Alignment Length:581 Identity:116/581 - (19%)
Similarity:202/581 - (34%) Gaps:198/581 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 ELYMGYQSFPSEMDWVCADAWKLTLGQSMFFVGSVVGSMVLGYLADVVGRLPILIVANLIAMTGN 149
            |:::...:.||....:|..:.|..:...:.::|.:.|:.:||.|||.:||..:|.::  :|:..:
Mouse   125 EIFVVSFALPSAEKDMCLSSSKKGMLGLIVYLGMMAGAFILGGLADKLGRKKVLSMS--LAINAS 187

  Fly   150 LLTIWS----TNVTLFCMFRMISGIATDSNFVMMYILVMEYMRPSVRTLGLSICIGFFYCLGSM- 209
            ..::.|    ....|||  |:||||....:..:::....|::....|...|| .:|.|:..|.: 
Mouse   188 FASLSSFVQGYGAFLFC--RLISGIGIGGSLPIVFAYFSEFLSREKRGEHLS-WLGIFWMTGGIY 249

  Fly   210 --AAPWIAV-------------LMRSWRGFLLTTSLPLLVVPFFYLIVPESIQWLISKQKYDSAV 259
              |..|..:             ...|||.|::..:||..|.......:|||.::|:...|:|.|.
Mouse   250 ASAMAWSIIPHYGWGFSMGTNYHFHSWRVFVIVCALPATVSMVALKFMPESPRFLLEMGKHDEAW 314

  Fly   260 VCLKRVAKINGR------------HVE-ESAYAEFIE-ECKCSQQNQKASPHLLDLFQT------ 304
            :.||:|...|.|            |:: .....|||| :.......|:.....:.:|:.      
Mouse   315 MILKQVHDTNMRAKGTPEKVFTVSHIKTPKQMDEFIEIQSSTGTWYQRWLVRFMTIFKQVWDNAL 379

  Fly   305 -----PRLRRHTLIL-------------------------------------------------- 314
                 | .|.:||||                                                  
Mouse   380 YCVMGP-YRMNTLILAVVWFTMALSYYGLTVWFPDMIRYFQDEEYKSKMKVFFGEHVHGATINFT 443

  Fly   315 -------------------FFKSMV-----ITLCY-------DAVSRNV---------------- 332
                               :||.::     ...||       |...:|.                
Mouse   444 MENQIHQHGKLVNDKFIKMYFKHVLFEDTFFDKCYFEDVTSTDTYFKNCTIESTTFYNTDLYKHK 508

  Fly   333 ---------------QGLGI-----SPFVMFSLS---ATAILPACLLIIALQDRIGRKAMASASL 374
                           :|..:     :.|:::.:|   :.::||..::...|.|||||..|...|:
Mouse   509 FINCRFINSTFLEQKEGCHMDFEEDNDFLIYLVSFLGSLSVLPGNIISALLMDRIGRLKMIGGSM 573

  Fly   375 LLSGI--FISVTGGIIFAASASDKTTTLLVSLSVVGRFGVTVAYNSGAQYATELIPTCVRGQGVA 437
            |:|.:  |....|.   :.||......|....|:       .|:|:......||.||..|.....
Mouse   574 LISAVCCFFLFFGN---SESAMIGWQCLFCGTSI-------AAWNALDVITVELYPTNQRATAFG 628

  Fly   438 AVH-------VAGYAFTFFSAYILFTRSVFSPLPEIILGVLSLL-GACLCLLLPETLHRTL 490
            .::       :.|.  |.|::::..|:.|     .|:|...||: |..:.|.||||..:.|
Mouse   629 ILNGLCKFGAILGN--TIFASFVGITKVV-----PILLAAASLVGGGLIALRLPETREQVL 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7342NP_001247196.1 2A0119 12..491 CDD:273328 116/581 (20%)
MFS 93..>243 CDD:119392 40/169 (24%)
Sv2bNP_001103223.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..73
synapt_SV2 8..683 CDD:130366 116/581 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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