DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7342 and Svopl

DIOPT Version :9

Sequence 1:NP_001247196.1 Gene:CG7342 / 42335 FlyBaseID:FBgn0038716 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_008761085.2 Gene:Svopl / 500085 RGDID:1566053 Length:446 Species:Rattus norvegicus


Alignment Length:420 Identity:95/420 - (22%)
Similarity:169/420 - (40%) Gaps:81/420 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 WKLTLGQSMFFVGSVVGSMVLGYLADVVGRLPILIVANLIAMTGNLLTIWSTNVTLFCMFRMISG 169
            |::....:|.|.|.:|.|::.|.|||..||..||:::.|.....:|||.:|.:...|...|.:.|
  Rat    36 WQVAFVTTMVFFGYMVSSILFGLLADRYGRWKILLLSFLWGAYFSLLTSFSPSYIWFVFLRTMVG 100

  Fly   170 IATDSNFVMMYILVMEYMRPSVRTLGLSICIGFFYCLG-----SMAAPWIAVLMRSWRGFLLTTS 229
            ... |......|:..|::....|...|.:. ..|:..|     |||:..|..:  .||..:...|
  Rat   101 CGV-SGHAQGLIIKTEFLPTKYRGYMLPLS-QVFWLAGSLLIISMASVVIPTI--GWRWLIRIAS 161

  Fly   230 LPLLVVPFFYLIVPESIQWLISKQKYDSAVVCLKRVAKINGRHVEESAYAEFIEECKCSQQNQKA 294
            :|.:::...:..:|||.::.:|.....:|:..|:.:||:|...:.|....|.|.|.:        
  Rat   162 IPGIILIMAFKFIPESARFNVSTGNTQAALDTLESIAKMNRSVMPEGRLVEPILEKR-------- 218

  Fly   295 SPHLLDLFQTPRLRRHTLILFFKSMVITLCYDAV---------------SRN------VQGLG-- 336
             ....||.::..||. ||.::...:.|:..|..|               |::      |:.:|  
  Rat   219 -GRFADLLESKYLRT-TLQIWIIWLGISFAYYGVILASAELLERDLVCGSKSESEPEVVENMGDA 281

  Fly   337 -----------ISP-----FVMFSLSATAILPACLLIIALQDRIGRKAMASASLLLSGIFISVTG 385
                       .:|     .::.:|...|:.|..:|.|   :.:||:...|.::..:.:|..:..
  Rat   282 EEGRSPCYCHMFAPSDYRTMIISTLGEIALNPLNILGI---NFLGRRLSLSITMGCTALFFLLLN 343

  Fly   386 GIIFAASASDKTTTLLVSLSVVGRFGVTVAYNSGAQYATELIPTCVRGQGVAAVHVAGYAFTFFS 450
              |..:||.      |:....:.|..|...:|:...|..|:.||.:|..|:..           |
  Rat   344 --ICTSSAG------LIGFLFMLRALVAANFNTIYIYTAEVYPTPMRALGMGT-----------S 389

  Fly   451 AYILFTRSVFSPLPEIILGVLSLLGACLCL 480
            ..:....::.:|....:|...|.||| |||
  Rat   390 GSLCRIGAMVAPFISQVLMSASFLGA-LCL 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7342NP_001247196.1 2A0119 12..491 CDD:273328 95/420 (23%)
MFS 93..>243 CDD:119392 37/142 (26%)
SvoplXP_008761085.2 MFS_SVOPL 3..434 CDD:341000 95/420 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347240
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.930

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