DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7342 and SLC22A

DIOPT Version :9

Sequence 1:NP_001247196.1 Gene:CG7342 / 42335 FlyBaseID:FBgn0038716 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_649370.1 Gene:SLC22A / 40437 FlyBaseID:FBgn0037140 Length:568 Species:Drosophila melanogaster


Alignment Length:534 Identity:123/534 - (23%)
Similarity:233/534 - (43%) Gaps:48/534 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VDKILEKCGDFSRLQMIMLLLFCVINVLSALHYYSQTIISFVPKYWCA---DGLPAS-IESPVDS 64
            :|.||:..|.|.|.|:|:.||.|:..:..|:...:....:....:.|:   ..||.| ...|..:
  Fly    27 LDAILKHLGQFGRFQLIIFLLICLPMMFHAMFSVTYVFTAATVTHRCSVEECDLPGSNYYEPHTN 91

  Fly    65 SCLPLNRNISTPNTCYSY-NYEL--------------------YMGYQSFPSEMDWV-------- 100
            ..:|  :|....::|..| |.||                    ...:..|....|.|        
  Fly    92 WSIP--KNGKDLDSCNRYTNSELPQWNHSVDICSADHFTKNKEACAHNEFVFRDDEVTISNDFGI 154

  Fly   101 -CADAWKLTLGQSMFFVGSVVGSMVLGYLADVVGRLPILIVANLIAMTGNLLTIWSTNVTLFCMF 164
             |.|.|||::..::..:|...|..:.|::||..||...:.:..::.....::..:|.:...|.:|
  Fly   155 FCDDEWKLSMVGTINNLGQFFGIPIGGFVADRYGRSFSIALGGILGAVLGVIRSFSPSYGWFLVF 219

  Fly   165 RMISGIATDSNFVMMYILVMEYMRPSVRTLGLSICIGFFYCLGSMAAPWIAVLMRSWRGFLLTTS 229
            ..:..:.:.:.:...:::.:|.:.|..|.|..|: |..||.:|.:.....|.....||..|..|.
  Fly   220 EFLDNMTSSTLYSTCFVIGIELVGPKRRVLACSV-ITVFYAVGEVLLAMSAKAFHDWRILLRITY 283

  Fly   230 LPLLVVPFFYLIVPESIQWLISKQKYDSAVVCLKRVAKINGRHVEESAYAEFI--EECKCSQQNQ 292
            .|.|::..::.|:|||::||:|:.|.:.|...|:|.|.:|.|.:.||...:.:  ...|..|.::
  Fly   284 GPSLILLAYFWILPESVRWLLSQGKEERAKNILRRAAHVNKRELPESVLDKLVLANRDKLQQSSE 348

  Fly   293 KASPHLLDLFQTPRLRRHTLILFFKSMVITLCYDAVSRNVQGLGISPFVMFSLSATAILPACLLI 357
            ...| :.:.|:..:.|.....|.:  :|..|.|..:|.||..|....:..|:..|...:|...:.
  Fly   349 SRFP-IREAFKNFKWRIANCSLCW--IVHVLVYYGLSLNVVLLDGDKYNNFAYIALVEIPGFFMP 410

  Fly   358 IALQDRIGRKAMASASLLLSGIFISVTGGIIFAASASDKTTTLLVSLSVVGRFGVTVAYNSGAQY 422
            :.:.||.||:......:|.||:...   |.||  :.:|:....|| |.:||:..:|.::.....:
  Fly   411 LLIMDRFGRRYSLCGLMLASGLCCI---GTIF--TGADQPVLQLV-LFLVGKLTITASFQVLYFF 469

  Fly   423 ATELIPTCVRGQGVAAVHVAGYAFTFFSAYILFTRSVFSPLPEIILGVLSLLGACLCLLLPETLH 487
            |:|:.||.:|...::...:.|...:..:.........::..|.::....:::...|.|..|||.:
  Fly   470 ASEIYPTNLRNSLLSFCSMMGRFGSMLAPQTPLLAKYYANAPAMLFAGAAIVSGLLTLFFPETTN 534

  Fly   488 RTLPTSLEDGENFG 501
            ..|||::::.:..|
  Fly   535 VVLPTTVQEADAIG 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7342NP_001247196.1 2A0119 12..491 CDD:273328 116/514 (23%)
MFS 93..>243 CDD:119392 35/158 (22%)
SLC22ANP_649370.1 2A0119 35..540 CDD:273328 118/516 (23%)
MFS 146..530 CDD:119392 90/393 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45458503
Domainoid 1 1.000 100 1.000 Domainoid score I351
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 97 1.000 Inparanoid score I321
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.990

Return to query results.
Submit another query.