DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7342 and svop-1

DIOPT Version :9

Sequence 1:NP_001247196.1 Gene:CG7342 / 42335 FlyBaseID:FBgn0038716 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_498960.2 Gene:svop-1 / 176250 WormBaseID:WBGene00014021 Length:520 Species:Caenorhabditis elegans


Alignment Length:534 Identity:117/534 - (21%)
Similarity:213/534 - (39%) Gaps:127/534 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VDKILEKCGDFSRLQMIMLLLFCVINVLSALHYYSQTIISFVPKYWCADGLPASIESPVDSSCLP 68
            ||:.:|..| |.|.|:.:.:|..:..:..|:.....::||  |...|..|: :|::..:.::|: 
 Worm    69 VDEAVEALG-FGRFQLKLSILTGMAWMADAMEMMLLSLIS--PALACEWGI-SSVQQALVTTCV- 128

  Fly    69 LNRNISTPNTCYSYNYELYMGYQSFPSEMDWVCADAWKLTLGQSMFFVGSVVGSMVLGYLADVVG 133
                                                          |.|.::.|...|.:.|..|
 Worm   129 ----------------------------------------------FSGMMLSSTFWGKICDRFG 147

  Fly   134 RLPILIVANLIAMTGNLLTIWSTNVTLFCMFRMIS--GIATDSNFVMMYILVMEYMRPSVRTLGL 196
            |...|..:.|:|....:::..|.:..:...||.::  ||......|.:|   .|:: |:.:....
 Worm   148 RRKGLTFSTLVACIMGVISGMSPHFYVLLFFRGLTGFGIGGVPQSVTLY---AEFL-PTAQRAKC 208

  Fly   197 SICIGFFYCLGSMAAPWIA-VLMRS--WRGFLLTTSLPL--LVVPFFYLIVPESIQWLISKQKYD 256
            .:.|..|:.:|::....:| .:|.|  ||..:..:||||  ..|..|:|  |||.::.::....:
 Worm   209 VVLIESFWAIGAVFEALLAYFVMESFGWRALMFLSSLPLGIFAVASFWL--PESARFDMASGHPE 271

  Fly   257 SAVVCLKRVAKIN------GRHVEESAYAEFIEECKCSQQNQKASPHLLDLFQTPRLRRHTLILF 315
            .|:..|:..|::|      ||         .:...|...:::....:||    :|.||:.|::|:
 Worm   272 RALETLQAAARMNRVQLPTGR---------LVSSTKAGSESRGDIANLL----SPDLRKTTILLW 323

  Fly   316 ---------FKSMVITL---------CYDAVSRN------VQGLGISPFVMFSLSATAI--LPAC 354
                     :..||:..         |:..:..|      .|.|..|.:  |.|.:|.:  .|..
 Worm   324 CIWAITAFSYYGMVLFTTVLFQSHDECHGGLFSNGTQMEVCQPLTRSDY--FDLLSTTLAEFPGL 386

  Fly   355 LLIIALQDRIGRKAMASASLLLSGIFISVTGGIIFAASASDK-TTTLLVSLSVVGRFGVTVAYNS 418
            ::.:.:.:..|||...:....:..||   |..:.|..   |: |.|:|:   .|.|..::.|:..
 Worm   387 IITVLIIEWFGRKKTMALEYAVFAIF---TFLLYFCL---DRFTVTVLI---FVARAFISGAFQC 442

  Fly   419 GAQYATELIPTCVRGQGV---AAVHVAGYAFTFFSAYILFTRSVFSPLPEIILGVLSLLGACLCL 480
            ...|..|:.||.:|..|:   :|:...|...|.|.|.:...:|:  .||..|.|..::||....|
 Worm   443 AYVYTPEVYPTTLRAVGLGTCSAMARIGAIVTPFIAQVASEKSL--SLPIGIYGTAAILGLIASL 505

  Fly   481 LLP-ETLHRTLPTS 493
            .|| ||..|.:..|
 Worm   506 SLPIETKGRQMMDS 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7342NP_001247196.1 2A0119 12..491 CDD:273328 113/522 (22%)
MFS 93..>243 CDD:119392 34/156 (22%)
svop-1NP_498960.2 2A0119 16..514 CDD:273328 115/527 (22%)
MFS 87..508 CDD:119392 104/502 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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