DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7342 and Ust5r

DIOPT Version :9

Sequence 1:NP_001247196.1 Gene:CG7342 / 42335 FlyBaseID:FBgn0038716 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_599207.2 Gene:Ust5r / 171398 RGDID:620985 Length:552 Species:Rattus norvegicus


Alignment Length:563 Identity:139/563 - (24%)
Similarity:243/563 - (43%) Gaps:92/563 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KILEKCGDFSRLQMIMLLLFCVINVLSALHYYSQTIISFVPKYWC----ADGLPAS--------- 57
            ::|.:.|...|.|::.:....:|||....|...:...:.:|.:.|    .|.:..|         
  Rat     5 ELLNQVGSLGRFQILQMAFVFLINVSVVPHSTIENFTAAIPSHRCWVPILDNVTVSDNHSRILNQ 69

  Fly    58 -----IESPVDS-----SC----------LPLNRNIST-----PNTCY-SYNYELYMGYQSFPSE 96
                 |..|:||     .|          |.||...|:     ...|. .:.|:....:.:..:|
  Rat    70 DKLLKISIPLDSHLRLDKCRRFAQPQWHLLDLNDTFSSVTEADTEPCVDGWVYDRSNFHSTTVTE 134

  Fly    97 MDWVCADAWKLTLGQSMFFVGSVVGSMVLGYLADVVGRLPILIVANL-IAMTGNLLTIWSTNVTL 160
            .|.||......::.:..|.:|:.:|.:|.|.|:|..||..:|..|.| :|:|...:. :::|..:
  Rat   135 WDLVCESQVLNSVTKFSFMIGAFIGGIVNGPLSDRFGRKFVLKCALLQMAITETCVG-FASNFFI 198

  Fly   161 FCMFRMISG-----IATDSNFVMM------YILVMEYMRPSVRTLGLSICIGFFYCLGSMAAPWI 214
            :|..|.::|     |..:||.:|.      ::.:|..:.|         |.|.|   |||....:
  Rat   199 YCSLRFLAGMTFEPILVNSNLLMFEWTSHKFLAMMSVIAP---------CAGSF---GSMILAGL 251

  Fly   215 AVLMRSWRGFLLTTSLPLLVVPFFYLI----VPESIQWLISKQKYDSAVVCLKRVAKINGRHVEE 275
            |...::|....|..|:|:    ||:||    :.||.:|||...|....:..|::||.:||  ::.
  Rat   252 AFQFQNWHHLQLAMSVPI----FFFLILTRWLSESARWLIVTNKPQKGLKELRKVAHMNG--MKN 310

  Fly   276 SAYAEFIEECKCSQQNQ----KASPHLLDLFQTPRLRRHTLILFFKSMVITLCYDAVSRNVQGLG 336
            |.....:|..:.|.:.:    ||.|...|||.||.||:....:.|..::..|....:|.::|.|.
  Rat   311 SGDNLTMEVVRTSMKRELEAAKARPSPRDLFHTPILRKRICAMSFMRILFMLSIFGMSLHLQHLS 375

  Fly   337 ISPFVM-FSLSATAILPACLLIIA--LQDRIGRKAMASASLLLSGIFISVTGGIIFAASASDKTT 398
            .:..:: |.:||:::|   ..:|.  :.:|:||:......:.|.||.|...   :|.........
  Rat   376 SNIMLLQFVVSASSLL---FSVIGPYVFNRMGRRITQMVVMTLRGICILTA---VFVPQEMQILR 434

  Fly   399 TLLVSLSVVGRFGVTVAYNSGAQYATELIPTCVRGQGVAAVHVAGYAFTFFSAYILFTRSVFSP- 462
            ..:|:|:  |.|. .:::.....:..||:||.:|...:..:.:.|.: .||.|.:....:.:|| 
  Rat   435 ITVVTLA--GAFS-ALSFGVNRLHTNELLPTTLRATAIGVIGMFGNS-GFFLAPLFMILASYSPN 495

  Fly   463 LPEIILGVLSLLGACLCLLLPETLHRTLPTSLEDGENFGKNDR 505
            ||.|..|..|:|......|||||.::.||..:.|..|..:..|
  Rat   496 LPWIFYGGFSILNGFTVFLLPETKNQPLPDCIHDIGNDWEESR 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7342NP_001247196.1 2A0119 12..491 CDD:273328 133/541 (25%)
MFS 93..>243 CDD:119392 43/165 (26%)
Ust5rNP_599207.2 MFS_OAT 109..516 CDD:340932 109/435 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347330
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X24
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.940

Return to query results.
Submit another query.