DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7333 and mdtM

DIOPT Version :10

Sequence 1:NP_650814.2 Gene:CG7333 / 42334 FlyBaseID:FBgn0038715 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_418757.1 Gene:mdtM / 948861 ECOCYCID:EG12576 Length:410 Species:Escherichia coli


Alignment Length:444 Identity:85/444 - (19%)
Similarity:140/444 - (31%) Gaps:146/444 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 DKSHHPAVGQSFFFMGSVVGTIIFGYLSDQVGRLPSLLMATLCGATGDFITSFVHTLPWFAFSRF 180
            |.|..|| ..|.:..|.:....:.|.|||::||.|.|:...|........|.|..::..|..:|.
E. coli    46 DVSLAPA-AVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATMFTTSMTQFLIARA 109

  Fly   181 MSGLSTDTMYYLMYILVFEYLSPKSRTFGLNIILAVFYCFGLMTSPWAAIWIGNWRRYLWLASL- 244
            :.|.|...:..:.|:.|.|..   .:|.|:.::       .::||            .:.:|.: 
E. coli   110 IQGTSICFIATVGYVTVQEAF---GQTKGIKLM-------AIITS------------IVLIAPII 152

  Fly   245 -PALGVLIYPFLICESAQWLLTKRKYDDAVICLKKVAKFNRRHVEESVFDEFVKYYRERELQDYK 308
             |..|..:..|:     .|     |...|:|.:..             |..||.           
E. coli   153 GPLSGAALMHFM-----HW-----KVLFAIIAVMG-------------FISFVG----------- 183

  Fly   309 LNSHEDTFLAMFLTPRLRRFTLTLLVKSVIITLSCDVINRNMEGLGTSPFKLFSF----TSIVYL 369
                    |.:.:...::|..:....|||:........||           ||.|    .|:.|:
E. coli   184 --------LLLAMPETVKRGAVPFSAKSVLRDFRNVFCNR-----------LFLFGAATISLSYI 229

  Fly   370 P------AGVAILLLQNKIGRKGMACTALFVGGLITTATGFMIAHL-DPTENALL---------- 417
            |      ....||:....:.....|.|.:.|.|.:..|...:...: ||||...:          
E. coli   230 PMMSWVAVSPVILIDAGSLTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVG 294

  Fly   418 LAIMV-----------------GLGRFGATVSYDAEIQYAAEIIPTSVRGQAVSNIHVIGLASSS 465
            |::::                 .|..||..:           |.||..|....||....|..|:|
E. coli   295 LSLLIVGNLLSPHVWLWSVLGTSLYAFGIGL-----------IFPTLFRFTLFSNKLPKGTVSAS 348

  Fly   466 LAFYVIYLAQYYKPLPSIFISCLMFFGAG--------------LCLTLPETLNK 505
            |...::.:...     |:.|...::|..|              :..||...||:
E. coli   349 LNMVILMVMSV-----SVEIGRWLWFNGGRLPFHLLAVVAGVIVVFTLAGLLNR 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7333NP_650814.2 2A0119 11..510 CDD:273328 85/444 (19%)
mdtMNP_418757.1 PRK15403 1..410 CDD:237958 85/444 (19%)

Return to query results.
Submit another query.