DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7333 and Sv2a

DIOPT Version :9

Sequence 1:NP_650814.2 Gene:CG7333 / 42334 FlyBaseID:FBgn0038715 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_071313.1 Gene:Sv2a / 64051 MGIID:1927139 Length:742 Species:Mus musculus


Alignment Length:548 Identity:111/548 - (20%)
Similarity:186/548 - (33%) Gaps:187/548 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 FMGSVVGTIIFGYLSDQVGRLPSLLMATLCGATGDFITSFVHTLPWFAFSRFMSGLSTDTMYYLM 193
            ::|.:||..::|.|:|::||...||::....:...|.:|||.....|.|.|.:||:.......::
Mouse   212 YLGMMVGAFLWGGLADRLGRRQCLLISLSVNSVFAFFSSFVQGYGTFLFCRLLSGVGIGGSIPIV 276

  Fly   194 YILVFEYLSPKSRTFGLNIILAVFYCFG---LMTSPWAAI----W---------IGNWRRYLWLA 242
            :....|:|:.:.|...|: .|.:|:..|   .....||.|    |         ..:||.::.:.
Mouse   277 FSYFSEFLAQEKRGEHLS-WLCMFWMIGGVYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVLVC 340

  Fly   243 SLP---ALGVL-IYPFLICESAQWLLTKRKYDDAVICLKKVAKFNRR---HVEESVFDEFVKYYR 300
            :.|   |:|.| ..|    ||.::.|...|:|:|.:.||:|...|.|   | .|.||.  |.:.:
Mouse   341 AFPSVFAIGALTTQP----ESPRFFLENGKHDEAWMVLKQVHDTNMRAKGH-PERVFS--VTHIK 398

  Fly   301 ERELQDYKLNSHEDT---------------------FLAMFLTPRLRRFTLTLL----------- 333
            ....:|..:....||                     ||:.| :|..||.||.::           
Mouse   399 TIHQEDELIEIQSDTGTWYQRWGVRALSLGGQVWGNFLSCF-SPEYRRITLMMMGVWFTMSFSYY 462

  Fly   334 ----------------------------------------------------------VKSVI-- 338
                                                                      :|||.  
Mouse   463 GLTVWFPDMIRHLQAVDYAARTKVFPGERVEHVTFNFTLENQIHRGGQYFNDKFIGLRLKSVSFE 527

  Fly   339 -----------ITLS------CDVIN------------------------RNME-------GLGT 355
                       :|.|      |..||                        .|.|       |.|.
Mouse   528 DSLFEECYFEDVTSSNTFFRNCTFINTVFYNTDLFEYKFVNSRLVNSTFLHNKEGCPLDVTGTGE 592

  Fly   356 SPFKLF--SFT-SIVYLPAGVAILLLQNKIGRKGMACTALFVGGLITTATGFMIAHLDPTENALL 417
            ..:.::  ||. ::..||..:...||.:||||..|     ..|..:.:...........:|:|::
Mouse   593 GAYMVYFVSFLGTLAVLPGNIVSALLMDKIGRLRM-----LAGSSVLSCVSCFFLSFGNSESAMI 652

  Fly   418 LAIMVGLGRFG--ATVSYDAEIQYAAEIIPTSVRGQAVSNIHVIGLASSSLAFYVI-YLAQYYKP 479
            ..:.:    ||  :..|::|......|:.|:..|..|...::.:...::.|...:. ......|.
Mouse   653 ALLCL----FGGVSIASWNALDVLTVELYPSDKRTTAFGFLNALCKLAAVLGISIFTSFVGITKA 713

  Fly   480 LPSIFISCLMFFGAGLCLTLPETLNKKL 507
            .|.:|.|..:..|:.|.|.||||..:.|
Mouse   714 APILFASAALALGSSLALKLPETRGQVL 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7333NP_650814.2 2A0119 11..510 CDD:273328 111/548 (20%)
MFS 126..499 CDD:119392 106/538 (20%)
Sv2aNP_071313.1 synapt_SV2 1..742 CDD:130366 111/548 (20%)
Interaction with SYT1. /evidence=ECO:0000250 1..57
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..145
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.