DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7333 and Svopl

DIOPT Version :9

Sequence 1:NP_650814.2 Gene:CG7333 / 42334 FlyBaseID:FBgn0038715 Length:541 Species:Drosophila melanogaster
Sequence 2:XP_008761085.2 Gene:Svopl / 500085 RGDID:1566053 Length:446 Species:Rattus norvegicus


Alignment Length:434 Identity:108/434 - (24%)
Similarity:180/434 - (41%) Gaps:88/434 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 FMGSVVGTIIFGYLSDQVGRLPSLLMATLCGATGDFITSFVHTLPWFAFSRFMSGLSTDTMYYLM 193
            |.|.:|.:|:||.|:|:.||...||::.|.||....:|||..:..||.|.|.|.|... :.:...
  Rat    46 FFGYMVSSILFGLLADRYGRWKILLLSFLWGAYFSLLTSFSPSYIWFVFLRTMVGCGV-SGHAQG 109

  Fly   194 YILVFEYLSPKSRTFGLNIILAVFYCFGLMTSPWAAIWIG--NWRRYLWLASLPALGVLIYPF-L 255
            .|:..|:|..|.|.:.|.:....:....|:....|::.|.  .||..:.:||:|.: :||..| .
  Rat   110 LIIKTEFLPTKYRGYMLPLSQVFWLAGSLLIISMASVVIPTIGWRWLIRIASIPGI-ILIMAFKF 173

  Fly   256 ICESAQWLLTKRKYDDAVICLKKVAKFNRRHVEESVFDEFVKYYRERELQDYKLNSHEDTFLAMF 320
            |.|||::.::......|:..|:.:||.||..:.|....|.:...|.|         ..|...:.:
  Rat   174 IPESARFNVSTGNTQAALDTLESIAKMNRSVMPEGRLVEPILEKRGR---------FADLLESKY 229

  Fly   321 LTPRLRRFTLTLLVKSV---IITLSCDVINRNM-------------EGL-----GTSPFKLFSF- 363
            |...|:.:.:.|.:...   :|..|.:::.|::             |.:     |.||.....| 
  Rat   230 LRTTLQIWIIWLGISFAYYGVILASAELLERDLVCGSKSESEPEVVENMGDAEEGRSPCYCHMFA 294

  Fly   364 -----TSIVYLPAGVAI----LLLQNKIGRK-----GMACTALFVGGLITTATGFMIAHLDPTEN 414
                 |.|:.....:|:    :|..|.:||:     .|.|||||          |::.:: .|.:
  Rat   295 PSDYRTMIISTLGEIALNPLNILGINFLGRRLSLSITMGCTALF----------FLLLNI-CTSS 348

  Fly   415 ALLLAIMVGLGRFGATVSYDAEIQYAAEIIPTSVRGQAVSNIHVIGLASSSLAFYVIYLAQYYKP 479
            |.|:..:..| |.....:::....|.||:.||.:|        .:|:.:|.   .:..:.....|
  Rat   349 AGLIGFLFML-RALVAANFNTIYIYTAEVYPTPMR--------ALGMGTSG---SLCRIGAMVAP 401

  Fly   480 LPSIFISCLMFFGAGLCL-------------TLP-ETLNKKLPE 509
            ..|..:....|.|| |||             ||| ||..:.|.:
  Rat   402 FISQVLMSASFLGA-LCLFSSVCVVCAISAFTLPIETKGRALQQ 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7333NP_650814.2 2A0119 11..510 CDD:273328 108/434 (25%)
MFS 126..499 CDD:119392 102/421 (24%)
SvoplXP_008761085.2 MFS_SVOPL 3..434 CDD:341000 103/422 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347242
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

Return to query results.
Submit another query.