DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7333 and Sv2c

DIOPT Version :10

Sequence 1:NP_650814.2 Gene:CG7333 / 42334 FlyBaseID:FBgn0038715 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_113781.1 Gene:Sv2c / 29643 RGDID:619718 Length:727 Species:Rattus norvegicus


Alignment Length:681 Identity:127/681 - (18%)
Similarity:210/681 - (30%) Gaps:268/681 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FSQVLDKCGNYGRFQVMILLLYGYTNILGSLHYFSQTLITFTPEHWCFHADLNGLSVEGIRSVYE 67
            :..::.:|| :||||..:..:.|                      ....||  |:.|..:..|..
  Rat   138 YELIIQECG-HGRFQWALFFVLG----------------------MALMAD--GVEVFVVGFVLP 177

  Fly    68 NISASSCTPLLGVVNGTGVVSTNRKCRNWIFNRESGYESITTELKWVCDKSHHPAVGQSFFFMGS 132
            :.....|.|                      |..||         |:          .|..::|.
  Rat   178 SAETDLCIP----------------------NSGSG---------WL----------GSIVYLGM 201

  Fly   133 VVGTIIFGYLSDQVGRLPSLLMATLCGATGDFITSFVHTLPWFAFSRFMSGLSTDTMYYLMYILV 197
            :||...:|.|:|:|||..|||:.........|::|||....:|...|.:||.........::...
  Rat   202 MVGAFFWGGLADKVGRKQSLLICMSVNGFFAFLSSFVQGYGFFLLCRLLSGFGIGGAIPTVFSYF 266

  Fly   198 FEYLSPKSRTFGLNIILAVFYCFGLMTS--PWAAI----W---------IGNWRRYLWLASLPAL 247
            .|.|:.:.|...|:.:...:...|:..|  .||.|    |         ..:||.::.:.:||.:
  Rat   267 AEVLAREKRGEHLSWLCMFWMIGGIYASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVIVCALPCV 331

  Fly   248 GVLIYPFLICESAQWLLTKRKYDDAVICLKKVAKFN--RRHVEESVF-----------DEFVK-- 297
            ..::....:.||.::||...|:|:|.:.||.:...|  .|...|.||           ||.::  
  Rat   332 SSVVALTFMPESPRFLLEVGKHDEAWMILKLIHDTNMRARGQPEKVFTVNKIKTPKQIDELIEIE 396

  Fly   298 -----YYR------ERELQDYKLNSHEDTFLAMFLTPRLRRFTLTLLVKSVIITLS--------- 342
                 :||      ..||....|     ||:..|..| :|..|:.|.:  |..|||         
  Rat   397 SDTGTWYRRCFVRIRTELYGIWL-----TFMRCFNYP-VRENTIKLTI--VWFTLSFGYYGLSVW 453

  Fly   343 ----------------------------------------------------------------- 342
                                                                             
  Rat   454 FPDVIKHLQSDEYALLTRNVQKDKYANFSINFTMENQVHTGMEYDNGRFLGVKFKSVTFKDSVFK 518

  Fly   343 ----------------CDVINRNMEGLGTSPFKLF-------SFT-------------------- 364
                            |..|:...|.....|:|..       ||.                    
  Rat   519 SCTFDDVTSVNTYFKNCTFIDTLFENTDFEPYKFIDSEFQNCSFLHNKTGCQITFDDDYSAYWIY 583

  Fly   365 ------SIVYLPAGVAILLLQNKIGR----------KGMACTALFVGGLITTATGFMIAHLDPTE 413
                  ::..||..:...||.::|||          .|::|..|:.|    |:...||.      
  Rat   584 FVNFLGTLAVLPGNIVSALLMDRIGRLTMLGGSMVLSGISCFFLWFG----TSESMMIG------ 638

  Fly   414 NALLLAIMVGLGRFGATVS-YDAEIQYAAEIIPTSVRGQAVSNIHVIGLASSSLAFYVI-YLAQY 476
               :|.:..||     |:| :::......|:.||..|......::.:..|::.|...:. .|...
  Rat   639 ---MLCLYNGL-----TISAWNSLDVVTVELYPTDRRATGFGFLNALCKAAAVLGNLIFGSLVSI 695

  Fly   477 YKPLPSIFISCLMFFGAGLCLTLPETLNKKL 507
            .|.:|.:..|.::..|..:.|.||:|..:.|
  Rat   696 TKAIPILLASTVLVCGGLVGLRLPDTRTQVL 726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7333NP_650814.2 2A0119 11..510 CDD:273328 126/673 (19%)
Sv2cNP_113781.1 synapt_SV2 1..727 CDD:130366 127/681 (19%)
Interaction with SYT1. /evidence=ECO:0000269|PubMed:15866046 1..57
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..120
(Microbial infection) C.botulinum neurotoxin type A-binding. /evidence=ECO:0000269|PubMed:16543415, ECO:0000269|PubMed:27294781 529..566 7/36 (19%)
Blue background indicates that the domain is not in the aligned region.

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