DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dys and ACTN1

DIOPT Version :9

Sequence 1:NP_001036722.1 Gene:Dys / 42327 FlyBaseID:FBgn0260003 Length:3598 Species:Drosophila melanogaster
Sequence 2:XP_016877209.1 Gene:ACTN1 / 87 HGNCID:163 Length:1106 Species:Homo sapiens


Alignment Length:1019 Identity:219/1019 - (21%)
Similarity:359/1019 - (35%) Gaps:351/1019 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 KTFTKWINSHLIDTQCTPVKDLFLDLRDGHRLLALLSTLTQTNL-KPEKGRMRVHHINNLNKVIT 79
            :|||.|.||||.... |.::::..|.|||.:|:.||..::...| |||:|:||||.|:|:||.:.
Human    64 ETFTAWCNSHLRKAG-TQIENIEEDFRDGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALD 127

  Fly    80 EIQQHGVKLVNISSDDIVGGNAKLTLGLIWLIALEFNGQHLVKSHSSNGVEKSLLAWARQYTEPH 144
            .|...|||||:|.:::||.||.|:|||:||.|.|.|..|.:  |......::.||.|.::.|.|:
Human   128 FIASKGVKLVSIGAEEIVDGNVKMTLGMIWTIILRFAIQDI--SVEETSAKEGLLLWCQRKTAPY 190

  Fly   145 -GLQLNDFSSSWSDGRAFLMILDAHVEELNLQAALQQ-HALKRLHLAFDLAHRHFKIEKLLDAED 207
             .:.:.:|..||.||..|..::..|..||.....|:: ..|..|:.|||:|.::..|.|:|||||
Human   191 KNVNIQNFHISWKDGLGFCALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAED 255

  Fly   208 -VHTHKPDNKSIQMYVMCLYHAMESMRTRQQEQEQDEGQDQDPGRVPCTSITDLDEVPLDNDQTS 271
             |.|.:||.|:|..||...|||.                                          
Human   256 IVGTARPDEKAIMTYVSSFYHAF------------------------------------------ 278

  Fly   272 LGLYTSDSAGSMEQRSSGELKTHSMRPLSTATNASVEISGYQSALEAVLTLLLEDEQLLSQNLPD 336
                            ||..|.      .||.|...:          ||.:..|:|||:      
Human   279 ----------------SGAQKA------ETAANRICK----------VLAVNQENEQLM------ 305

  Fly   337 PQDFQTAKLQFHENESFMLKLTEHQEYVGEALEEGSNLINESQKAGAGLSQEDQNEVR------- 394
             :|::  ||           .::..|::...:....|.:.|:.........||..:.|       
Human   306 -EDYE--KL-----------ASDLLEWIRRTIPWLENRVPENTMHAMQQKLEDFRDYRRLHKPPK 356

  Fly   395 -QQMVLLNERWETLRLRALDVQAKILMRLAEFQKQKLEQLRQFLTSVEDRISHMSDIGPTLEEAE 458
             |:...|...:.||:                 .|.:|.....|:.|....:|.:::....||:.|
Human   357 VQEKCQLEINFNTLQ-----------------TKLRLSNRPAFMPSEGRMVSDINNAWGCLEQVE 404

  Fly   459 K-----QLLEAQKLKADLSEQQELVDSLSSMVVIVNDTSGNFNDLEDRLSALGERWSHVVKWSDL 518
            |     .|.|.::|        |.:|.|:.          .|.    :.:::.|.|:..: |..|
Human   405 KGYEEWLLNEIRRL--------ERLDHLAE----------KFR----QKASIHEAWTDAM-WPSL 446

  Fly   519 RKEK-------------LQQYKCISRWLDAREQDLKLMESRDVTDVGGITQRINELNY------- 563
            ...|             |.:.|.:.:..:|.|.||...:.| |..:..|.|.:|||:|       
Human   447 NPGKEAMLRQKDYETATLSEIKALLKKHEAFESDLAAHQDR-VEQIAAIAQELNELDYYDSPSVN 510

  Fly   564 --CAKDLLELQRYLIDLRQMVAATLQDGDDKGERVLIQLESYEDRLDALKQIVEVQTVRIETKGF 626
              |.|        :.|....:.|..|...:       .||..|..|:.:.|:             
Human   511 ARCQK--------ICDQWDNLGALTQKRRE-------ALERTEKLLETIDQL------------- 547

  Fly   627 NFGRDRASYDDSRVVRPEGWVDYQMIIRFGEDDSQEDDDEHDLASKKRKLRNADNFNALENHIME 691
                               :::|                          .:.|..||        
Human   548 -------------------YLEY--------------------------AKRAAPFN-------- 559

  Fly   692 HFGYVQEVEQKLQQLQRQSLRQQCELLKELQAENSRRCGTLPELKKLYEVCELEDPSRNLLLE-E 755
                 ..:|..::.||...:....|.::.|...:.:...|||:          .|..|..:|. .
Human   560 -----NWMEGAMEDLQDTFIVHTIEEIQGLTTAHEQFKATLPD----------ADKERLAILGIH 609

  Fly   756 THIKQLEQRYANLSQKLSSQQSESHTLLAKEKYYNSLTGFKLVLADSRDWYKQHAGSASGNELEQ 820
            ..:.::.|.|              |..:|....|.::|                     ..|:..
Human   610 NEVSKIVQTY--------------HVNMAGTNPYTTIT---------------------PQEING 639

  Fly   821 RLSHMESLASEISEAKT---ATEELDDNLIEWKQDFGL---FYDSW--HDMKQALQALIQQRGGE 877
            :..|:..|.....:|.|   |.::.::.|   ::.||.   ....|  ..|::..:..|:..|  
Human   640 KWDHVRQLVPRRDQALTEEHARQQHNERL---RKQFGAQANVIGPWIQTKMEEIGRISIEMHG-- 699

  Fly   878 SLSRQLKQIQDFVTKVSNQKVRVSNLEVMQEQQHFLNQLLDEMESLRLTYDNIPKHLIGEELQTA 942
            :|..||..::.:...:.|.|.::..|    |..|   ||:.|    .|.:||...:...|.::..
Human   700 TLEDQLSHLRQYEKSIVNYKPKIDQL----EGDH---QLIQE----ALIFDNKHTNYTMEHIRVG 753

  Fly   943 WNRLPEQLNERVIKQTTAIEN--------------LNHFAAEYN 972
            |    |||...:.:....:||              :|.|.|.:|
Human   754 W----EQLLTTIARTINEVENQILTRDAKGISQEQMNEFRASFN 793

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DysNP_001036722.1 CH 13..111 CDD:278723 46/95 (48%)
CH 129..225 CDD:278723 36/98 (37%)
SPEC 312..525 CDD:238103 41/238 (17%)
SbcC <325..957 CDD:223496 115/675 (17%)
Smc <816..1591 CDD:224117 38/179 (21%)
SPEC 1174..1365 CDD:238103
SPEC 1289..1485 CDD:295325
SPEC 2369..2576 CDD:238103
SPEC 2477..2714 CDD:238103
WW 2852..2882 CDD:238122
EF-hand_2 2883..2997 CDD:286194
EF-hand_3 3001..3100 CDD:286195
ZZ_dystrophin 3110..3158 CDD:239074
ACTN1XP_016877209.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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