DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dys and actn2b

DIOPT Version :9

Sequence 1:NP_001036722.1 Gene:Dys / 42327 FlyBaseID:FBgn0260003 Length:3598 Species:Drosophila melanogaster
Sequence 2:NP_001032662.1 Gene:actn2b / 641575 ZFINID:ZDB-GENE-051127-39 Length:895 Species:Danio rerio


Alignment Length:822 Identity:210/822 - (25%)
Similarity:355/822 - (43%) Gaps:184/822 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ILID---ERQHIQKKTFTKWINSHLIDTQCTPVKDLFLDLRDGHRLLALLSTLTQTNL-KPEKGR 65
            :|:|   |:|  |:||||.|.||.|.... |.::::..|.|:|.:|:.||..::...| ||::|:
Zfish    31 LLLDPAWEKQ--QRKTFTAWCNSRLRKAG-TQIENIEEDFRNGLKLMLLLEVISGERLPKPDRGK 92

  Fly    66 MRVHHINNLNKVITEIQQHGVKLVNISSDDIVGGNAKLTLGLIWLIALEFNGQHLVKSHSSNGVE 130
            ||.|.|.|:||.:..|...|||||:|.:::||.||.|:|||:||.|.|.|..|.:  |......:
Zfish    93 MRFHKIANVNKALDFITSKGVKLVSIGAEEIVDGNVKMTLGMIWTIILRFAIQDI--SVEETSAK 155

  Fly   131 KSLLAWARQYTEPH-GLQLNDFSSSWSDGRAFLMILDAHVEELNLQAAL-QQHALKRLHLAFDLA 193
            :.||.|.::.|.|: .:.:.:|..||.||.|...::..|..:|...|.| :...|..|:||||:|
Zfish   156 EGLLLWCQRKTAPYRNVNVQNFHVSWKDGLALCALIHRHRPDLIDYAKLNKDDPLGNLNLAFDIA 220

  Fly   194 HRHFKIEKLLDAEDV-HTHKPDNKSIQMYVMCLYHA---------------------------ME 230
            .:|..|.|:|||||: .|.|||.::|..||.|.|||                           ||
Zfish   221 EKHLDIPKMLDAEDILSTPKPDERAIMTYVSCFYHAFAGAEQAETAANRICKVLGVNQENEKLME 285

  Fly   231 S------------MRT-----------------RQQEQEQDEGQDQDPGRV--PCTSITDLDEVP 264
            .            .||                 |:.|..:|..:...|.:|  .|..     |:.
Zfish   286 DYERLASELLEWIRRTIPWLENRAAEKTMVEMQRKLEDFRDYRRMHKPPKVQEKCQL-----EIS 345

  Fly   265 LDNDQTSL------------GLYTSDSAGS---MEQRSSG--ELKTHSMRPLSTATNASVEISGY 312
            .:..||.|            |...||.|.:   :||...|  |.....:|.|....:.:.:....
Zfish   346 FNTLQTKLRISNRPAFMPSEGKMVSDIASAWQGLEQAEKGYEEWLLTEIRRLERVEHLAEKFRQK 410

  Fly   313 QSALEAVLTLLLEDEQLLSQNLPDPQDFQTAKLQ-----FHENESFMLKLTEHQEYVGEALEEGS 372
            .|..|:..|   ..|::|::     :|:::|.|.     ..::|:|...|:.||:.| |.:...:
Zfish   411 ASNHESWAT---GKEEMLTR-----KDYESASLMEVRALLRKHEAFESDLSAHQDRV-EQIAAIA 466

  Fly   373 NLINESQKAGAGLSQEDQNEVRQQMVLLNERWETL------RLRALDVQAKILMRLAEFQKQKLE 431
            ..:||       |...|...|.|:...:.:.|:.|      |..||:...|:|..:.:...:..:
Zfish   467 QELNE-------LDYHDVASVNQRCQSICDLWDHLGTLTQRRREALERTEKLLETVDQLFLEYAK 524

  Fly   432 QLRQFLTSVEDRISHMSD--IGPTLEEAEKQLLEAQKLKADLSE---QQELVDSLSSMVVIVNDT 491
            :...|...:|..:..:.|  |..|:||.:..:...::.||.|||   :::.:..:...|:.:..:
Zfish   525 RSAPFNNWMEGAMEDLQDMFIVHTIEEVQTLIAAHEQFKATLSEADAERQAILGIQQEVLKIFQS 589

  Fly   492 SGNFNDLEDRLSALGERWSHVVKWSDLRKEKLQQYKCISRWLDARE---QDLKLMESRDVTDVG- 552
            .|...||.:..|.:... ...:||..::|...|:...:...| ||:   :.|:...:.....:| 
Zfish   590 YGIRGDLTNPYSTITAE-EIAIKWDKVKKLVPQRDSALQEEL-ARQHANERLRRQFAAQANLIGP 652

  Fly   553 GITQRINELNYCAKDL---LELQRYLIDLRQMVAATLQDGDDKGERVLIQLESYEDRLDALKQIV 614
            .|..|:.|:.:|:..:   ||.|  :..|:|.            |.|::..:|..|||:...|::
Zfish   653 WIQTRMEEIGHCSMAMGGTLEDQ--MTQLKQY------------EHVIVSYKSNIDRLEGDHQLI 703

  Fly   615 EVQTVRIETKGFNFGRDRASYDDSRVVRPEGW-------------VDYQMIIRFGEDDSQEDDDE 666
            : :::..:.|..|:     :.:..||    ||             ::.|::.|..:..|||  ..
Zfish   704 Q-ESLIFDNKHTNY-----TMEHVRV----GWELLLTTIARTINEIETQILTRDAKGISQE--QM 756

  Fly   667 HDLAS-------KKRKLRNADNFNALENHIMEHFGY-VQEVE 700
            |:..|       |:....::|:|.|    .:...|| :.|||
Zfish   757 HEFRSSFNHFDRKENGGMDSDDFRA----CLISMGYDLGEVE 794

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DysNP_001036722.1 CH 13..111 CDD:278723 44/98 (45%)
CH 129..225 CDD:278723 37/98 (38%)
SPEC 312..525 CDD:238103 48/228 (21%)
SbcC <325..957 CDD:223496 89/420 (21%)
Smc <816..1591 CDD:224117
SPEC 1174..1365 CDD:238103
SPEC 1289..1485 CDD:295325
SPEC 2369..2576 CDD:238103
SPEC 2477..2714 CDD:238103
WW 2852..2882 CDD:238122
EF-hand_2 2883..2997 CDD:286194
EF-hand_3 3001..3100 CDD:286195
ZZ_dystrophin 3110..3158 CDD:239074
actn2bNP_001032662.1 CH 43..141 CDD:214479 44/98 (45%)
CH 153..258 CDD:237981 41/104 (39%)
Spectrin 282..391 CDD:278843 22/113 (19%)
SPEC 403..630 CDD:238103 49/243 (20%)
Spectrin 638..740 CDD:278843 24/125 (19%)
EFh 758..820 CDD:238008 10/41 (24%)
EFhand_Ca_insen 825..891 CDD:285885
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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