Sequence 1: | NP_001036722.1 | Gene: | Dys / 42327 | FlyBaseID: | FBgn0260003 | Length: | 3598 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_008757363.1 | Gene: | Sptbn4 / 308458 | RGDID: | 1304682 | Length: | 2609 | Species: | Rattus norvegicus |
Alignment Length: | 2562 | Identity: | 502/2562 - (19%) |
---|---|---|---|
Similarity: | 870/2562 - (33%) | Gaps: | 920/2562 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 LIDERQHIQKKTFTKWINSHLIDTQCTPVKDLFLDLRDGHRLLALLSTLTQTNL-KPEKGRMRVH 69
Fly 70 HINNLNKVITEIQQHGVKLVNISSDDIVGGNAKLTLGLIWLIALEFNGQHLVK-----SHSSNGV 129
Fly 130 EKSLLAWARQYTEPH-GLQLNDFSSSWSDGRAFLMILDAHVEEL-NLQAALQQHALKRLHLAFDL 192
Fly 193 AHRHFKIEKLLDAEDVHTHKPDNKSIQMYVMCLYHAMESMRTRQQEQEQDEGQDQDPGRVPCTSI 257
Fly 258 TDLDEVPLDNDQTSLGLYTSDSAGSMEQRSSGELKTHSMRPLSTATNASV--EISGYQSALEAVL 320
Fly 321 TLLLEDEQLLSQNLPDPQDFQ------------TAKLQFHENESFMLKLTEHQEYVGEALEEGSN 373
Fly 374 LINESQKAGAGLSQEDQNEVRQQMVLLNERWETLRLRALDVQAKILMRLAEFQKQKLEQLRQFLT 438
Fly 439 SVEDRISHMSDIGPTLEEAEKQLLEAQKLKADLSEQQELVDSLSSMVVIVNDTSGNFNDLEDRLS 503
Fly 504 ALG---------ERWSHVVKWSDL------RKEKLQQYKCISR----------WLD-------AR 536
Fly 537 EQDLKLMESRDVT--------DVGGITQRINELNYCAKDLLELQRY------------------L 575
Fly 576 IDLRQMVA----------------------------------ATLQDGDDKG-----------ER 595
Fly 596 VLIQLESYEDRLDALKQIVEVQTVR----IETKGFNFG-----------RDRAS--------YDD 637
Fly 638 SRVVRPEGWVDYQMIIRFGED-----DSQED--------DDEHDLASKKRKLRNADNFNALENHI 689
Fly 690 MEHFG---------------------------YVQEVEQ------KLQQLQRQSLR--------- 712
Fly 713 ---QQCEL---------------------------LKELQAENSRRCGTLPELKK-LYEVCELED 746
Fly 747 PSRN-----------------------------LLLEETHIKQLEQRYANLSQKLSSQQS----- 777
Fly 778 -------------------------ESHTLLAKEKY-----------------YNSLTGF----- 795
Fly 796 KLVLADSR------------DWY---KQHAGSASG------NELEQRLSHMESLASEI------- 832
Fly 833 ------SEAKTATE--------ELDDNL----IEWKQDFGLFYDSWHDMKQAL------------ 867
Fly 868 --QALIQQRGG-------------ESLSRQLKQIQDFVT--KVSNQKVRVSNLEVMQEQQHFLNQ 915
Fly 916 LLDEMESLRLTYDNIPKHLIGEELQTAWNRLPEQLNERVIKQTTAIEN------LNHFAAEYNAI 974
Fly 975 IAMLRSAADSKLNGSDGASSQDLRKLEIDVISARNFSEILIKEAEPAQKESLQSQIRALNTLYDQ 1039
Fly 1040 VEQVHREKKEQQTVLQSHIDL---IQLRLKETDQWLTDLESNTPKSGISDIVNSNELFQSKSRFQ 1101
Fly 1102 TLKETCERETTQFRDLNERGGELLLQMD-ELQDQDRESRYGSLAKQFTRINA------RW-TEVT 1158
Fly 1159 ELVYAKTAL-LEHISTQLGEFKKFMVSE--TGYLDKLENKIRNTPENAADAEEIMEELDD----- 1215
Fly 1216 ----------------------------LENVLRSHS---EEWLDKIQEIGNELIDNEFMADSIR 1249
Fly 1250 RDIDETVQRWTQLQQQAKKRTELLEQKVSEAEQSEKCIVQFEKWLTRVD---------------- 1298
Fly 1299 DILSDHLDNDVTIVDQPEEFQRLAHEFVANEKNFKEISELIDEHTRNGKVGAANRLQEQLNLMEV 1363
Fly 1364 RFKYCQAKLSKCTAIQHSYESRLNRAYTDLRNVERSTEVVDVASAGPNTVQTQYQKCLQIYRTLS 1428
Fly 1429 EIKSEIESTIKTGRRVCEDRYTKSPKQLSQRIDALKHLYNTLGENVTQSK--------------A 1479
Fly 1480 TLERLLTLARQLEECFDSADNL----------IRRFESPQE---------------VHD------ 1513
Fly 1514 ---------------------------RNSILLEFEDVLRRCEDHYNEYNKSCDQSCMVETRQR- 1550
Fly 1551 ----IDGLKA------------------TYHKLTSADIIKRLTEMKTTLQNLDNISLETLRAMEH 1593
Fly 1594 DL-----------KEINVPSNPEIEKLQQQV-------IAIVVDVLKTRFNEATTLAARNTSSPD 1640
Fly 1641 NDDTEIVVVSDTVRQRRA------------------RTPQSGESPS------------------- 1668
Fly 1669 ------------------SAHTSSSESPTKGVENSPGAVGDQVMPDLLPPQTFRLAESSTLFSQI 1715
Fly 1716 SLNPQKVTNTPPPKPAKTKRKAPSSPAQVVEIRVKNIQNDKMSVQNIDLEPQQGEIVDTVNILES 1780
Fly 1781 VEPFVPEYVETVQIVDLSEDSDSSVRVDSQGKEMRRSKSKHSLNETPLPKVSDNDEDSAEQEEDL 1845
Fly 1846 LRPSAEN------TSTPFLRVEKRRISFDEKRKRVANERDILRDSEEEEPKTPDTPRAAQVSKPK 1904
Fly 1905 RW-----RQLQ-----PEMDALEPESP 1921 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dys | NP_001036722.1 | CH | 13..111 | CDD:278723 | 48/98 (49%) |
CH | 129..225 | CDD:278723 | 33/97 (34%) | ||
SPEC | 312..525 | CDD:238103 | 43/239 (18%) | ||
SbcC | <325..957 | CDD:223496 | 171/1011 (17%) | ||
Smc | <816..1591 | CDD:224117 | 186/995 (19%) | ||
SPEC | 1174..1365 | CDD:238103 | 42/244 (17%) | ||
SPEC | 1289..1485 | CDD:295325 | 40/225 (18%) | ||
SPEC | 2369..2576 | CDD:238103 | |||
SPEC | 2477..2714 | CDD:238103 | |||
WW | 2852..2882 | CDD:238122 | |||
EF-hand_2 | 2883..2997 | CDD:286194 | |||
EF-hand_3 | 3001..3100 | CDD:286195 | |||
ZZ_dystrophin | 3110..3158 | CDD:239074 | |||
Sptbn4 | XP_008757363.1 | CH | 111..214 | CDD:237981 | 50/103 (49%) |
CH | 230..333 | CDD:237981 | 35/102 (34%) | ||
SPEC | 361..584 | CDD:238103 | 51/282 (18%) | ||
SPEC | 479..693 | CDD:238103 | 40/240 (17%) | ||
SPEC | 819..1031 | CDD:238103 | 35/214 (16%) | ||
SPEC | 1135..1239 | CDD:197544 | 20/107 (19%) | ||
SPEC | 1245..1453 | CDD:238103 | 52/260 (20%) | ||
SPEC | 1351..1558 | CDD:238103 | 56/252 (22%) | ||
SPEC | 1560..1771 | CDD:238103 | 38/227 (17%) | ||
SPEC | 1666..1878 | CDD:238103 | 44/239 (18%) | ||
Spectrin | 1878..1977 | CDD:278843 | 13/98 (13%) | ||
SPEC | 1987..>2154 | CDD:238103 | 28/170 (16%) | ||
PH | 2464..2566 | CDD:278594 | |||
PH_beta_spectrin | 2466..2570 | CDD:269975 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |