DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scsalpha2 and fdrA

DIOPT Version :10

Sequence 1:NP_650809.1 Gene:Scsalpha2 / 42326 FlyBaseID:FBgn0038708 Length:342 Species:Drosophila melanogaster
Sequence 2:NP_415051.1 Gene:fdrA / 946298 ECOCYCID:G6287 Length:555 Species:Escherichia coli


Alignment Length:196 Identity:48/196 - (24%)
Similarity:80/196 - (40%) Gaps:29/196 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 PDA--TVIFIPPPSAAEGICAAIESEIGLIVAITEGIPQADMVRISQMLNCQEKSRL-LGPNC-- 155
            |||  .:|.:....|||....|::..:. ::..::.:...|.:::.  ...:||..| :||:|  
E. coli   116 PDANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLK--TRAREKGLLVMGPDCGT 177

  Fly   156 PGIISPDQCKIGIMPGDIHKRGVVGIVSRSGTLTYESVHQTTNVGLGQALCVGLGGDPFN----G 216
            ..|.........:||     .|.:|::..|||...|...|....|.|....:||||...:    |
E. coli   178 SMIAGTPLAFANVMP-----EGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGG 237

  Fly   217 TSFIDALKVFLSDKEIKGIVMIGEIGGSAEEEAADFLK----EKNTGCEAKPVVGFIAGQTAPPG 277
            .|.:.||::..:|::.:.:..:.:....|..     ||    .|.||   ||.|....|.|....
E. coli   238 ISALTALEMLSADEKSEVLAFVSKPPAEAVR-----LKIVNAMKATG---KPTVALFLGYTPAVA 294

  Fly   278 R 278
            |
E. coli   295 R 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Scsalpha2NP_650809.1 PTZ00187 16..327 CDD:240307 48/196 (24%)
fdrANP_415051.1 PRK06091 1..555 CDD:180395 48/196 (24%)

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