DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scsalpha2 and Suclg1

DIOPT Version :10

Sequence 1:NP_650809.1 Gene:Scsalpha2 / 42326 FlyBaseID:FBgn0038708 Length:342 Species:Drosophila melanogaster
Sequence 2:NP_063932.2 Gene:Suclg1 / 56451 MGIID:1927234 Length:346 Species:Mus musculus


Alignment Length:326 Identity:193/326 - (59%)
Similarity:251/326 - (76%) Gaps:6/326 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SKMLLRALTPQILRRGKADYGKTVCNLK---INKATKVLVQGFTGKQATFHSEESIKYGTNIVGG 68
            :::|.|..   :|::....:|....:.|   |:|.||::.|||||||.||||:::::|||.:|||
Mouse    24 ARLLSRTF---LLQQNGIRHGSYTASRKHIYIDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGG 85

  Fly    69 VNPKKGGTEHLGKPVFKSVAEAVEKAKPDATVIFIPPPSAAEGICAAIESEIGLIVAITEGIPQA 133
            ..|.|||.:|||.|||.:|.||.||....|:||::|||.||..|..||::||.|:|.|||||||.
Mouse    86 TTPGKGGQKHLGLPVFNTVKEAKEKTGATASVIYVPPPFAAAAINEAIDAEIPLVVCITEGIPQQ 150

  Fly   134 DMVRISQMLNCQEKSRLLGPNCPGIISPDQCKIGIMPGDIHKRGVVGIVSRSGTLTYESVHQTTN 198
            ||||:...|..|..:||:||||||:|:|.:||||||||.|||:|.:||||||||||||:|||||.
Mouse   151 DMVRVKHRLTRQGTTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQ 215

  Fly   199 VGLGQALCVGLGGDPFNGTSFIDALKVFLSDKEIKGIVMIGEIGGSAEEEAADFLKEKNTGCEAK 263
            |||||:||:|:||||||||.|||.|:|||:|...:||::||||||.|||.||.||||.|:|.:||
Mouse   216 VGLGQSLCIGIGGDPFNGTDFIDCLEVFLNDPATEGIILIGEIGGHAEENAAAFLKEHNSGPKAK 280

  Fly   264 PVVGFIAGQTAPPGRRMGHAGAIISGGKGAAKDKVAALEKAGVRMTANPCHLGSTLLEEMIRLKL 328
            |||.||||.|||||||||||||||:||||.||:|::||:.|||.::.:|..||:|:.:|..:.|:
Mouse   281 PVVSFIAGITAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYKEFEKRKM 345

  Fly   329 V 329
            :
Mouse   346 L 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Scsalpha2NP_650809.1 PTZ00187 16..327 CDD:240307 190/313 (61%)
Suclg1NP_063932.2 PTZ00187 19..344 CDD:240307 192/322 (60%)

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