DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scsalpha2 and suclg1

DIOPT Version :10

Sequence 1:NP_650809.1 Gene:Scsalpha2 / 42326 FlyBaseID:FBgn0038708 Length:342 Species:Drosophila melanogaster
Sequence 2:NP_001002577.2 Gene:suclg1 / 436850 ZFINID:ZDB-GENE-040912-101 Length:324 Species:Danio rerio


Alignment Length:298 Identity:191/298 - (64%)
Similarity:240/298 - (80%) Gaps:0/298 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 NLKINKATKVLVQGFTGKQATFHSEESIKYGTNIVGGVNPKKGGTEHLGKPVFKSVAEAVEKAKP 96
            ||.|||.|||:.:||||||.||||::|:.||:.:||||:|.|||..|||.|||.||.||.:....
Zfish    27 NLYINKNTKVICRGFTGKQGTFHSQQSLDYGSQLVGGVSPGKGGKTHLGLPVFNSVKEAKDGTGA 91

  Fly    97 DATVIFIPPPSAAEGICAAIESEIGLIVAITEGIPQADMVRISQMLNCQEKSRLLGPNCPGIISP 161
            :||||::|||.||..|..||::|:.|.|.|||||||.||||:...|..|.|:||:||||||:|:|
Zfish    92 EATVIYVPPPFAAAAIIEAIDAEMPLAVCITEGIPQQDMVRVKHRLLRQNKTRLVGPNCPGVINP 156

  Fly   162 DQCKIGIMPGDIHKRGVVGIVSRSGTLTYESVHQTTNVGLGQALCVGLGGDPFNGTSFIDALKVF 226
            .:||||||||.|||:|.:||||||||||||:|||||.|||||:||:|:||||||||:|||.|:||
Zfish   157 GECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCIGIGGDPFNGTNFIDCLEVF 221

  Fly   227 LSDKEIKGIVMIGEIGGSAEEEAADFLKEKNTGCEAKPVVGFIAGQTAPPGRRMGHAGAIISGGK 291
            |.|.:.:||::||||||.|||.||::||:.|:|..|||||.||||.|||||||||||||.|:|||
Zfish   222 LQDPKTEGIILIGEIGGDAEENAAEYLKQHNSGANAKPVVSFIAGLTAPPGRRMGHAGAFIAGGK 286

  Fly   292 GAAKDKVAALEKAGVRMTANPCHLGSTLLEEMIRLKLV 329
            |.||:|:|||:.|||.::.:|..||||:.:|..:.|::
Zfish   287 GGAKEKIAALQSAGVVVSMSPAQLGSTIFKEFEKRKML 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Scsalpha2NP_650809.1 PTZ00187 16..327 CDD:240307 190/294 (65%)
suclg1NP_001002577.2 PTZ00187 8..322 CDD:240307 190/294 (65%)

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