DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scsalpha2 and Scsalpha1

DIOPT Version :9

Sequence 1:NP_650809.1 Gene:Scsalpha2 / 42326 FlyBaseID:FBgn0038708 Length:342 Species:Drosophila melanogaster
Sequence 2:NP_001189044.1 Gene:Scsalpha1 / 38447 FlyBaseID:FBgn0004888 Length:328 Species:Drosophila melanogaster


Alignment Length:309 Identity:209/309 - (67%)
Similarity:252/309 - (81%) Gaps:0/309 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 RGKADYGKTVCNLKINKATKVLVQGFTGKQATFHSEESIKYGTNIVGGVNPKKGGTEHLGKPVFK 85
            |..:.|.||..|||:|..::|:.|||||||.||||:::::|||.:|||::||||||:|||.|||.
  Fly    20 RCNSQYNKTRGNLKLNGDSRVICQGFTGKQGTFHSQQALEYGTKLVGGISPKKGGTQHLGLPVFA 84

  Fly    86 SVAEAVEKAKPDATVIFIPPPSAAEGICAAIESEIGLIVAITEGIPQADMVRISQMLNCQEKSRL 150
            |||||.:...|.||||::|||.||..|..|:|:||.|||.||||:||.|||::...|..|.||||
  Fly    85 SVAEAKKATDPHATVIYVPPPGAAAAIIEALEAEIPLIVCITEGVPQHDMVKVKHALISQSKSRL 149

  Fly   151 LGPNCPGIISPDQCKIGIMPGDIHKRGVVGIVSRSGTLTYESVHQTTNVGLGQALCVGLGGDPFN 215
            :||||||||:|:|||||||||.|||||.:|:||||||||||:|||||.|||||.||||:||||||
  Fly   150 VGPNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVHQTTEVGLGQTLCVGIGGDPFN 214

  Fly   216 GTSFIDALKVFLSDKEIKGIVMIGEIGGSAEEEAADFLKEKNTGCEAKPVVGFIAGQTAPPGRRM 280
            ||.|||.|:|||.|.|.|||::||||||.|||:|||:|.|.|:|.:|||||.||||.:|||||||
  Fly   215 GTDFIDCLEVFLKDPETKGIILIGEIGGVAEEKAADYLTEYNSGIKAKPVVSFIAGVSAPPGRRM 279

  Fly   281 GHAGAIISGGKGAAKDKVAALEKAGVRMTANPCHLGSTLLEEMIRLKLV 329
            ||||||||||||.|.||:||||||||.:|.:|..:|..|.:||.||:||
  Fly   280 GHAGAIISGGKGGANDKIAALEKAGVIVTRSPAKMGHELFKEMKRLELV 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Scsalpha2NP_650809.1 PTZ00187 16..327 CDD:240307 206/305 (68%)
CoA_binding 36..129 CDD:280747 56/92 (61%)
Ligase_CoA 182..306 CDD:278948 97/123 (79%)
Scsalpha1NP_001189044.1 PTZ00187 22..325 CDD:240307 204/302 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457283
Domainoid 1 1.000 179 1.000 Domainoid score I1058
eggNOG 1 0.900 - - E1_COG0074
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 418 1.000 Inparanoid score I440
Isobase 1 0.950 - 0 Normalized mean entropy S294
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247548at2759
OrthoFinder 1 1.000 - - FOG0002539
OrthoInspector 1 1.000 - - otm26305
orthoMCL 1 0.900 - - OOG6_100834
Panther 1 1.100 - - P PTHR11117
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1662
1211.750

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