DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scsalpha2 and SPOM_SPAC16E8.17C

DIOPT Version :10

Sequence 1:NP_650809.1 Gene:Scsalpha2 / 42326 FlyBaseID:FBgn0038708 Length:342 Species:Drosophila melanogaster
Sequence 2:NP_594230.1 Gene:SPOM_SPAC16E8.17C / 2542341 PomBaseID:SPAC16E8.17C Length:331 Species:Schizosaccharomyces pombe


Alignment Length:310 Identity:192/310 - (61%)
Similarity:240/310 - (77%) Gaps:1/310 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LRRGKADYGKTVCNLKINKATKVLVQGFTGKQATFHSEESIKYGTNIVGGVNPKKGGTEHLGKPV 83
            |:..|:.|.:|:.||.||..|||:.|||||||.|||::.::.|||.:|||.||||.||.||||||
pombe    21 LKNSKSLYEQTIPNLMINSDTKVIFQGFTGKQGTFHAQHAMDYGTKVVGGTNPKKAGTTHLGKPV 85

  Fly    84 FKSVAEAVEKAKPDATVIFIPPPSAAEGICAAIESEIGLIVAITEGIPQADMVRISQMLNCQEKS 148
            |.::.||:::.|.||:.:|:|||.||..|..||.:|:.|||||||||||.||:|:|.:|..|.||
pombe    86 FGTIEEAMKETKADASAVFVPPPLAAGAIEEAIAAEVPLIVAITEGIPQHDMLRVSDILKTQSKS 150

  Fly   149 RLLGPNCPGIISPDQCKIGIMPGDIHKRGVVGIVSRSGTLTYESVHQTTNVGLGQALCVGLGGDP 213
            ||:||||||||.|.||||||||..|||.|.:||||||||||||:|:|||...|||:|.:|:||||
pombe   151 RLVGPNCPGIIRPGQCKIGIMPSHIHKPGCIGIVSRSGTLTYEAVNQTTQTDLGQSLVIGIGGDP 215

  Fly   214 FNGTSFIDALKVFLSDKEIKGIVMIGEIGGSAEEEAADFLKEKNTG-CEAKPVVGFIAGQTAPPG 277
            |.||:||||||:||.|...:||::||||||||||:||:|::..|.. ...||||.||||.|||.|
pombe   216 FPGTNFIDALKLFLDDPNTQGIILIGEIGGSAEEDAAEFIRAANASRSTPKPVVSFIAGATAPKG 280

  Fly   278 RRMGHAGAIISGGKGAAKDKVAALEKAGVRMTANPCHLGSTLLEEMIRLK 327
            |||||||||::||||.|..|..|||.||||::.:|..|||.::||:.:||
pombe   281 RRMGHAGAIVAGGKGTAAAKFEALEAAGVRISRSPATLGSLIVEELNKLK 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Scsalpha2NP_650809.1 PTZ00187 16..327 CDD:240307 190/308 (62%)
SPOM_SPAC16E8.17CNP_594230.1 PTZ00187 22..330 CDD:240307 189/307 (62%)

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