DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scsalpha2 and sucl-1

DIOPT Version :9

Sequence 1:NP_650809.1 Gene:Scsalpha2 / 42326 FlyBaseID:FBgn0038708 Length:342 Species:Drosophila melanogaster
Sequence 2:NP_510450.1 Gene:sucl-1 / 181570 WormBaseID:WBGene00007350 Length:322 Species:Caenorhabditis elegans


Alignment Length:313 Identity:205/313 - (65%)
Similarity:242/313 - (77%) Gaps:7/313 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LTPQI------LRRGKAD-YGKTVCNLKINKATKVLVQGFTGKQATFHSEESIKYGTNIVGGVNP 71
            |:.||      |::|.|. |..|..||||||.|||:||||||||.|||.::.::|.|.:|||||.
 Worm     2 LSQQIANNARTLQKGAARFYNSTYNNLKINKDTKVIVQGFTGKQGTFHGKQMLEYNTKVVGGVNA 66

  Fly    72 KKGGTEHLGKPVFKSVAEAVEKAKPDATVIFIPPPSAAEGICAAIESEIGLIVAITEGIPQADMV 136
            .|.||||||.||||:|:||..|...||:||::|..:|...|..|:::||.|:|.|||||||.|||
 Worm    67 NKAGTEHLGLPVFKNVSEARNKTGADASVIYVPASAAGSAIEEAMDAEIPLVVCITEGIPQHDMV 131

  Fly   137 RISQMLNCQEKSRLLGPNCPGIISPDQCKIGIMPGDIHKRGVVGIVSRSGTLTYESVHQTTNVGL 201
            |:...|..|.|:||:|||||||||.||||||||||.|||||.:||||||||||||:|||||.||.
 Worm   132 RVKSRLLKQNKTRLVGPNCPGIISADQCKIGIMPGHIHKRGCIGIVSRSGTLTYEAVHQTTQVGF 196

  Fly   202 GQALCVGLGGDPFNGTSFIDALKVFLSDKEIKGIVMIGEIGGSAEEEAADFLKEKNTGCEAKPVV 266
            ||.||||:||||||||:|||.|.|||.|.|.|||::|||||||||||||.:|||.|:|...||||
 Worm   197 GQTLCVGIGGDPFNGTNFIDCLNVFLEDPETKGIILIGEIGGSAEEEAAAYLKEHNSGANRKPVV 261

  Fly   267 GFIAGQTAPPGRRMGHAGAIISGGKGAAKDKVAALEKAGVRMTANPCHLGSTL 319
            .||||.||||||||||||||||||||.|.||:.||.:|||.:|.:|..||:::
 Worm   262 SFIAGVTAPPGRRMGHAGAIISGGKGTAADKINALREAGVVVTDSPAKLGTSM 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Scsalpha2NP_650809.1 PTZ00187 16..327 CDD:240307 204/311 (66%)
CoA_binding 36..129 CDD:280747 52/92 (57%)
Ligase_CoA 182..306 CDD:278948 95/123 (77%)
sucl-1NP_510450.1 PTZ00187 5..322 CDD:240307 204/310 (66%)
CoA_binding 31..124 CDD:280747 52/92 (57%)
Ligase_CoA 177..302 CDD:278948 96/124 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162590
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0074
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S294
OMA 1 1.010 - - QHG60703
OrthoDB 1 1.010 - - D1247548at2759
OrthoFinder 1 1.000 - - FOG0002539
OrthoInspector 1 1.000 - - otm14432
orthoMCL 1 0.900 - - OOG6_100834
Panther 1 1.100 - - O PTHR11117
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1662
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.710

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