DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Scsalpha2 and sucl-2

DIOPT Version :9

Sequence 1:NP_650809.1 Gene:Scsalpha2 / 42326 FlyBaseID:FBgn0038708 Length:342 Species:Drosophila melanogaster
Sequence 2:NP_497288.1 Gene:sucl-2 / 175252 WormBaseID:WBGene00017759 Length:321 Species:Caenorhabditis elegans


Alignment Length:313 Identity:199/313 - (63%)
Similarity:242/313 - (77%) Gaps:2/313 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RALTPQILRRGKADYGKTVCNLKINKATKVLVQGFTGKQATFHSEESIKYGTNIVGGVNPKKGGT 76
            ||.|...:.|  :.|..|..||.|||:|||:||||||:|.||||::.::|.||:||||:|.|.|.
 Worm    10 RAATRAAVTR--SVYNDTRNNLMINKSTKVIVQGFTGRQGTFHSKQMLEYNTNLVGGVSPNKAGQ 72

  Fly    77 EHLGKPVFKSVAEAVEKAKPDATVIFIPPPSAAEGICAAIESEIGLIVAITEGIPQADMVRISQM 141
            .|||.|||.|||||.::...|||||::|...||..|..|:::||||||||||||||.||||:...
 Worm    73 THLGLPVFGSVAEAKDRTGADATVIYVPAAGAARAIHEAMDAEIGLIVAITEGIPQQDMVRVKNR 137

  Fly   142 LNCQEKSRLLGPNCPGIISPDQCKIGIMPGDIHKRGVVGIVSRSGTLTYESVHQTTNVGLGQALC 206
            |..|.|||||||||||||:...||||||||.|||:|.:||||||||||||:|||||.|||||..|
 Worm   138 LLKQNKSRLLGPNCPGIIASGDCKIGIMPGHIHKKGCIGIVSRSGTLTYEAVHQTTTVGLGQTRC 202

  Fly   207 VGLGGDPFNGTSFIDALKVFLSDKEIKGIVMIGEIGGSAEEEAADFLKEKNTGCEAKPVVGFIAG 271
            :|:||||||||:|||.|:|||.|::.|||::||||||.|||:||:|||.:|:|..|||||.||||
 Worm   203 IGIGGDPFNGTNFIDCLEVFLEDEQTKGIILIGEIGGQAEEQAAEFLKSRNSGSNAKPVVSFIAG 267

  Fly   272 QTAPPGRRMGHAGAIISGGKGAAKDKVAALEKAGVRMTANPCHLGSTLLEEMI 324
            .|||||||||||||||:||||.|.||:.||..|.|.:|.:|..||..:.:.::
 Worm   268 VTAPPGRRMGHAGAIIAGGKGTAGDKIEALRNANVVVTDSPAKLGVAMQKALL 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Scsalpha2NP_650809.1 PTZ00187 16..327 CDD:240307 196/309 (63%)
CoA_binding 36..129 CDD:280747 56/92 (61%)
Ligase_CoA 182..306 CDD:278948 91/123 (74%)
sucl-2NP_497288.1 PTZ00187 19..319 CDD:240307 196/301 (65%)
CoA_binding 32..125 CDD:280747 56/92 (61%)
Ligase_CoA 178..303 CDD:304578 91/124 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162589
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0074
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S294
OMA 1 1.010 - - QHG60703
OrthoDB 1 1.010 - - D1247548at2759
OrthoFinder 1 1.000 - - FOG0002539
OrthoInspector 1 1.000 - - otm14432
orthoMCL 1 0.900 - - OOG6_100834
Panther 1 1.100 - - O PTHR11117
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1662
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.710

Return to query results.
Submit another query.