DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scsalpha2 and sucl-2

DIOPT Version :10

Sequence 1:NP_650809.1 Gene:Scsalpha2 / 42326 FlyBaseID:FBgn0038708 Length:342 Species:Drosophila melanogaster
Sequence 2:NP_497288.1 Gene:sucl-2 / 175252 WormBaseID:WBGene00017759 Length:321 Species:Caenorhabditis elegans


Alignment Length:313 Identity:199/313 - (63%)
Similarity:242/313 - (77%) Gaps:2/313 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RALTPQILRRGKADYGKTVCNLKINKATKVLVQGFTGKQATFHSEESIKYGTNIVGGVNPKKGGT 76
            ||.|...:.|  :.|..|..||.|||:|||:||||||:|.||||::.::|.||:||||:|.|.|.
 Worm    10 RAATRAAVTR--SVYNDTRNNLMINKSTKVIVQGFTGRQGTFHSKQMLEYNTNLVGGVSPNKAGQ 72

  Fly    77 EHLGKPVFKSVAEAVEKAKPDATVIFIPPPSAAEGICAAIESEIGLIVAITEGIPQADMVRISQM 141
            .|||.|||.|||||.::...|||||::|...||..|..|:::||||||||||||||.||||:...
 Worm    73 THLGLPVFGSVAEAKDRTGADATVIYVPAAGAARAIHEAMDAEIGLIVAITEGIPQQDMVRVKNR 137

  Fly   142 LNCQEKSRLLGPNCPGIISPDQCKIGIMPGDIHKRGVVGIVSRSGTLTYESVHQTTNVGLGQALC 206
            |..|.|||||||||||||:...||||||||.|||:|.:||||||||||||:|||||.|||||..|
 Worm   138 LLKQNKSRLLGPNCPGIIASGDCKIGIMPGHIHKKGCIGIVSRSGTLTYEAVHQTTTVGLGQTRC 202

  Fly   207 VGLGGDPFNGTSFIDALKVFLSDKEIKGIVMIGEIGGSAEEEAADFLKEKNTGCEAKPVVGFIAG 271
            :|:||||||||:|||.|:|||.|::.|||::||||||.|||:||:|||.:|:|..|||||.||||
 Worm   203 IGIGGDPFNGTNFIDCLEVFLEDEQTKGIILIGEIGGQAEEQAAEFLKSRNSGSNAKPVVSFIAG 267

  Fly   272 QTAPPGRRMGHAGAIISGGKGAAKDKVAALEKAGVRMTANPCHLGSTLLEEMI 324
            .|||||||||||||||:||||.|.||:.||..|.|.:|.:|..||..:.:.::
 Worm   268 VTAPPGRRMGHAGAIIAGGKGTAGDKIEALRNANVVVTDSPAKLGVAMQKALL 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Scsalpha2NP_650809.1 PTZ00187 16..327 CDD:240307 196/309 (63%)
sucl-2NP_497288.1 PTZ00187 19..319 CDD:240307 196/301 (65%)

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