DRSC/TRiP Functional Genomics Resources

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Protein Alignment Aptx and APTX

DIOPT Version :10

Sequence 1:NP_650805.1 Gene:Aptx / 42322 FlyBaseID:FBgn0038704 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_195751.2 Gene:APTX / 830940 AraportID:AT5G01310 Length:710 Species:Arabidopsis thaliana


Alignment Length:204 Identity:77/204 - (37%)
Similarity:111/204 - (54%) Gaps:28/204 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SWSSALIKDISKP---ENLIIS-SEIAVVIADKFPKAQHHYLVLPLAD-IPSIFHLNRSHLSLLE 61
            :|:.||......|   ||:::. .:..|||.|::|||:.|.|||...: :..:..:.:.:|.||:
plant   513 TWALALHSIAMHPERHENVVLEYLDNIVVINDQYPKARKHVLVLARQESLDGLEDVRKENLQLLQ 577

  Fly    62 ELHLLARNVVEVKGVRWQD----------FNVGFHAEPSMQRLHLHVISKDFVSTSLKTKKHWNS 116
            |:|    ||    |::|.|          |.:|:|:.|||::|||||||:||.|.|||.||||||
plant   578 EMH----NV----GLKWVDRFQNEDASLIFRLGYHSVPSMRQLHLHVISQDFNSDSLKNKKHWNS 634

  Fly   117 FNTELFVPYTKLYAQLEKENSISRLPKSLKDELLAKPLICNQCEFVARNLPSLKGHLVG-HLQDP 180
            |.|..|.....:   ||:.||..:...:.:| ||...|.||:|.....|:|.||.|:.. |.|.|
plant   635 FTTSFFRDSVDV---LEEVNSQGKANVASED-LLKGELRCNRCRSAHPNIPKLKSHVRSCHSQFP 695

  Fly   181 KSVCQRVRL 189
            ..:.|..||
plant   696 DHLLQNNRL 704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AptxNP_650805.1 DcpS_C 8..113 CDD:463415 44/119 (37%)
zf-C2HE 118..179 CDD:465082 19/61 (31%)
DcpS_C 235..339 CDD:463415
zf-C2HE 344..406 CDD:465082
KLF1_2_4_N <511..585 CDD:425360
APTXNP_195751.2 NACHT 10..>42 CDD:444362
COG4639 27..165 CDD:443677
YmdB <255..296 CDD:441713
YmdB 326..>442 CDD:441713
DcpS_C 524..631 CDD:463415 44/114 (39%)
zf-C2HE 636..690 CDD:465082 18/57 (32%)
Blue background indicates that the domain is not in the aligned region.

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