DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18493 and pcp-4

DIOPT Version :10

Sequence 1:NP_650803.1 Gene:CG18493 / 42319 FlyBaseID:FBgn0038701 Length:480 Species:Drosophila melanogaster
Sequence 2:NP_507841.1 Gene:pcp-4 / 180301 WormBaseID:WBGene00003959 Length:1042 Species:Caenorhabditis elegans


Alignment Length:488 Identity:125/488 - (25%)
Similarity:220/488 - (45%) Gaps:62/488 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KNLNRGPPHQVVTKR----------ANVQEKWITQKLDNFNASNTQTYQMRYLLNDEFQTEGSPI 91
            :.|.|.|...:..:|          |..::....|:.|:|:..|...:|.::..|.::...|.|.
 Worm   518 RTLPRTPSRGIFHRRHLELLASSYPAGFEQGTFRQRQDHFDNLNVDFFQQKFYKNSQWARPGGPN 582

  Fly    92 FIYLGGE------WEIEESMVSAGHWYDMAQEHNGVLVYTEHRYYGQSIPTSTMSTEDLKYLDVK 150
            |:.:||:      |.:.|.:    .|...||::...:...|||:||.|:   ..:..:|..|...
 Worm   583 FLMIGGQEAEGESWVLNEKL----PWLISAQKYGATVYLLEHRFYGDSL---VGNNTNLNLLSSL 640

  Fly   151 QALADVAVFIETFKAENPQLANSKVILAGGSYSATMVVWFKRLYPDLIVGGWASSAPILAKVDFT 215
            |.|.|.|.||   ||.|.:..:|...:..|. |..:..|.:.::|||:.|..:||..||||.||.
 Worm   641 QVLYDSAEFI---KAINYKTQSSTPWITFGR-SFPLSAWTRAIFPDLVTGAVSSSGAILAKTDFF 701

  Fly   216 EYKEVVGQAFLQLGGQKCYDRIENGIAELESMFANKRG-AEARAMLRLCNSFDDQ-NDLDLWTLF 278
            ||..|: :..::.....|.|||::|..|:..:|....| .:...:.:|...|.:. .:.|....|
 Worm   702 EYLMVM-ETSIRKYDNSCADRIKSGFDEIRGLFLTSEGRQDLSKIFQLLPGFSENVTETDQHFFF 765

  Fly   279 SSISNIFAGVAQYQGTGD--------IEYYC----------DYLLSFNDDATAIANFVYWAWGMG 325
            |::.:.|....|:.|...        |...|          |.:::||...|:..|......|||
 Worm   766 SNLYSNFQLAVQFSGDNSGPWADGYGIPEMCRFMTGAGTPLDNIVAFNAYMTSFNNGGGTYTGMG 830

  Fly   326 NCIDA---RYEGSVEYYLWGVDHFDASRPWYYQTCNEYGWYQSSGSRNQPFGTKFPATLYINLCG 387
            |...|   ..:.|.:|    .:..|.:..|.:|||.|||.:||:.|.:..||:..|.:..|.:|.
 Worm   831 NNYTAMIYNLKNSKDY----GEGVDPTLLWTWQTCTEYGGFQSADSGSGLFGSPVPVSFLIQMCM 891

  Fly   388 DVFSSQYGNEQINNNAASTNEYFGGME--PGVDNIYMTHGELDPWNPMGHGVEQGATVIA----N 446
            |:|.:.|...:|::....||..:||.:  .| .|:...:|.:||::.:|......::|::    .
 Worm   892 DLFGNTYDRSKIDSLIDFTNYKYGGRDNFKG-SNVVFINGNIDPYHVLGLFNSPDSSVVSYLIDG 955

  Fly   447 ASHCSDFGSIKSTDSDEMRASKEKLAELVRQWL 479
            :|||:|....:.:|...::.:::.:.:.:..||
 Worm   956 SSHCADMFPARDSDVPGLKVARDLVDQNIGVWL 988

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18493NP_650803.1 alpha/beta hydrolases 61..471 CDD:473884 118/444 (27%)
pcp-4NP_507841.1 alpha/beta hydrolases 46..473 CDD:473884
Peptidase_S28 552..980 CDD:310284 118/444 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.