DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18493 and pcp-1

DIOPT Version :10

Sequence 1:NP_650803.1 Gene:CG18493 / 42319 FlyBaseID:FBgn0038701 Length:480 Species:Drosophila melanogaster
Sequence 2:NP_498688.1 Gene:pcp-1 / 176086 WormBaseID:WBGene00003956 Length:565 Species:Caenorhabditis elegans


Alignment Length:522 Identity:135/522 - (25%)
Similarity:218/522 - (41%) Gaps:71/522 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VVLAIGLVQSLDIPKIKDVPLLVKTLKNLNRGPPHQVVTKRANVQEKWI-TQKLDNFNASNTQTY 74
            |:|.:.||......:.:....|.:...|.:..|        :|||..|. ..|||:|...:|:|:
 Worm     6 VLLLVALVSVEASRRSRLFKKLYQKASNYDAAP--------SNVQTVWYKNMKLDHFTWGDTRTF 62

  Fly    75 QMRYLLNDEFQTEGSPIFIYLGGEWEIEESMVSAGHWYDMAQEHNGVLVYTEHRYYGQSIP---T 136
            .||.:.|:.|...|.|||.|.|.|..:|..:.:.|..:|:|...|..:::.|||:|||:.|   .
 Worm    63 DMRVMWNNTFYKPGGPIFFYTGNEGGLESFVTATGMMFDLAPMFNASIIFAEHRFYGQTQPFGNQ 127

  Fly   137 STMSTEDLKYLDVKQALADVAVFIETFKAENPQL-----ANSKVILAGGSYSATMVVWFKRLYPD 196
            |..|..::.||..:|||||.|..:...|.:|.|.     |.::||..||||...:..||::.||.
 Worm   128 SYASLANVGYLTSEQALADYAELLTELKRDNNQFKMTFPAATQVISFGGSYGGMLSAWFRQKYPH 192

  Fly   197 LIVGGWASSAPIL----AKVDFTEYKEVVGQAFLQLGGQK-CYDRIENGIAELESMFANKRGAEA 256
            ::.|.||.|||::    ..||...:..:..:.::..|..: ......|....|.|..|.::....
 Worm   193 IVKGAWAGSAPLIYMNGGGVDPGAFDHITSRTYIDNGCNRFILANAWNATLNLSSTDAGRQWLNN 257

  Fly   257 RAMLRLCNSFDDQNDLDLWTLFSSISNIFAGVA-QYQGTGDIEY---------------YCDYL- 304
            ..:.:|......:|..|.|.|     |.:...| :|....|..|               .|.|: 
 Worm   258 NTVFKLDPRTKIRNQTDGWNL-----NAYLREAIEYMAMVDYPYPTGFLEPLPAWPVTVACGYMN 317

  Fly   305 ---LSFNDD--ATAIANF--VYWAW----GMGNCIDARYEGSVEYYLWGVDHFDASRPWYYQTCN 358
               .||:|.  ..|:||.  :|:.:    ....|||....|.......|.|...    |.:|.|:
 Worm   318 ANGTSFSDKDLVKAVANAANIYYNYNRDPNFTYCIDFSICGDQGTGGLGGDELG----WPWQECS 378

  Fly   359 EYGWYQ-SSGSRNQPFGTKFPATLYINL---CGDVFSSQYGNEQINNNAASTNEYFGGMEPGVDN 419
            |..... :||..|..|..:....:|..|   |..:|.|. |....|.|..:....:|....|..|
 Worm   379 EIIMAMCASGGSNDVFWNECGKDIYQTLQQGCVSIFKSM-GWTPKNWNIDAVKTLYGYDLSGSSN 442

  Fly   420 IYMTHGELDPWNPMGHGVEQGATV-------IANASHCSDFGSIKSTDSDEMRASKEKLAELVRQ 477
            :.:|.|.||||:..|:.|:|....       |..::|..|.....:.|.:.:..::.::.::::.
 Worm   443 LILTQGHLDPWSGGGYKVDQNNAARGIYVLEIPGSAHHLDLRQPNTCDPNTVTNARFQIIQILKC 507

  Fly   478 WL 479
            |:
 Worm   508 WV 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18493NP_650803.1 alpha/beta hydrolases 61..471 CDD:473884 123/461 (27%)
pcp-1NP_498688.1 alpha/beta hydrolases 50..498 CDD:473884 123/457 (27%)

Return to query results.
Submit another query.