DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ino80 and PIE1

DIOPT Version :9

Sequence 1:NP_732413.1 Gene:Ino80 / 42314 FlyBaseID:FBgn0086613 Length:1638 Species:Drosophila melanogaster
Sequence 2:NP_187887.3 Gene:PIE1 / 820463 AraportID:AT3G12810 Length:2055 Species:Arabidopsis thaliana


Alignment Length:1550 Identity:416/1550 - (26%)
Similarity:658/1550 - (42%) Gaps:373/1550 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 SKRKSRLLASKEERQS-------VKAQLYNFNDLTSDREWLYDL-----------LLSDTESDDP 128
            :||:..|.|.||.|:.       ::...:...|..|:|:|....           :|.....::.
plant    29 AKRQKTLEAPKEPRRPKTHWDHVLEEMAWLSKDFESERKWKLAQAKKVALRASKGMLDQASREER 93

  Fly   129 TITEDEYVQQLLREHVREQRQRKNYYKKAANAQYAYYGSGLLSNHDIFAERQLATAGVRKRRRRT 193
            .:.|:|  |:|.:..:...:..|.::.|.  .:...|...|:.|.             :|::...
plant    94 KLKEEE--QRLRKVALNISKDMKKFWMKV--EKLVLYKHQLVRNE-------------KKKKAMD 141

  Fly   194 KQ-EILMAR-------LAEAQAGPKPPKQRRRGRKKR----DNMGSPESGEVPPSELGKYTFGDT 246
            || |.|:.:       |||...  :|.||.:....|.    ::....|..|..|.|:        
plant   142 KQLEFLLGQTERYSTMLAENLV--EPYKQGQNTPSKPLLTIESKSDEERAEQIPPEI-------- 196

  Fly   247 LPNNEDDDEDGG-EVDYKRELASLALDYPEEEEIEEEVDVEGGTEGQVTKVRRKRKNPAALAARR 310
              |:....|.|. |:|...:|.|       |:|.|::.|.....|...||..|:.:..|......
plant   197 --NSSAGLESGSPELDEDYDLKS-------EDETEDDEDTIEEDEKHFTKRERQEELEALQNEVD 252

  Fly   311 RRIWQIMSKKESGRLQR----IKSNNHKEMLANCKRVAG--------MCAKVVRQRA--INSQRI 361
            ..:.:::.:..|||:.|    :|..| ::.|.:..||..        ..|.|.:...  .|:...
plant   253 LPVEELLRRYTSGRVSRETSPVKDEN-EDNLTSVSRVTSPVKDENQDNLASVGQDHGEDKNNLAA 316

  Fly   362 MKETVWR-AKRLTREMLAYWKRYERVERDQRRKQEREAEEQRKQDVELIEVKRQQRKLNFLITQT 425
            .:||... :.|.:.:...:....|....|........:.:.||:| ...:...:|..::|:    
plant   317 SEETEGNPSVRRSNDSYGHLAISETHSHDLEPGMTTASVKSRKED-HTYDFNDEQEDVDFV---- 376

  Fly   426 ELYAHFMSKKLGQGSEEDQLRILSQLDEETNA---RLAAQDDYDAGEMKLLAQENAEAAMQ---- 483
                      |..|.|:|        ||.|.|   .||..|:.|..|...|.|:.:|..::    
plant   377 ----------LANGEEKD--------DEATLAVEEELAKADNEDHVEEIALLQKESEMPIEVLLA 423

  Fly   484 --------RDLDKTRAFDVFAKKKEK---EEEEQAQESVED---------IKPEPRPEM------ 522
                    :|:.:..:...||..::.   .:|.:.|..::|         :.|||..|.      
plant   424 RYKEDFGGKDISEDESESSFAVSEDSIVDSDENRQQADLDDDNVDLTECKLDPEPCSENVEGTFH 488

  Fly   523 -------KDLPQ----------------------------PKMFKGTLKGYQIKGMTWLANIYDQ 552
                   ||...                            |.:.|.:|:.||..|:.||..:|::
plant   489 EVAEDNDKDSSDKIADAAAAARSAQPTGFTYSTTKVRTKLPFLLKHSLREYQHIGLDWLVTMYEK 553

  Fly   553 GISGILADEMGLGKTVQSIAFLCHIAEHYGVWGPFLVISPASTLHNWQQEMSRFVPDFKVVPYWG 617
            .::||||||||||||:.:||.|.|:|...|:|||.|::.|.|.:.||:.|..::.|.||::.|:|
plant   554 KLNGILADEMGLGKTIMTIALLAHLACDKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFG 618

  Fly   618 SPAERKILRQFWDQKHLHTRDASFHVVITSYQLVVSDYKYFNRIKWQYMVLDEAQAIKSAASQRW 682
            |..|||:.||.|.:.:      ||||.||:|:||:.|.|.|.|.||:|::||||..||:..||||
plant   619 SAKERKLKRQGWMKLN------SFHVCITTYRLVIQDSKMFKRKKWKYLILDEAHLIKNWKSQRW 677

  Fly   683 KLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPTLFDSHDEFNEWFSKDIESHAENKTGIDEK 747
            :.||.|:.:.|:||:|||:||.:.|||:|:||:||.:|.||.||.:||...|....|.:..|:::
plant   678 QTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFCNPIAGMVEGQEKINKE 742

  Fly   748 QISRLHMILKPFMLRRIKKDVENELSDKIEIMVYCPLTIRQKLLYRALKQKIRIEDLLHLTSGST 812
            .|.|||.:|:||:|||:|:|||.:|..|.|.:::|.|:.||:.||         ||.:..|. :.
plant   743 VIDRLHNVLRPFLLRRLKRDVEKQLPSKHEHVIFCRLSKRQRNLY---------EDFIASTE-TQ 797

  Fly   813 TTSSSSSASNLMNLVMQFRKVCNHPELFERRDARSPFFMRCAEYTIPRLIHEEGLIHRMLPSRKH 877
            .|.:|.|...:::::||.|||||||:|||.|...|.|.|...:..:...|               
plant   798 ATLTSGSFFGMISIIMQLRKVCNHPDLFEGRPIVSSFDMAGIDVQLSSTI--------------- 847

  Fly   878 LLYNRFNIFKSEYIQRSLFEDVNVNSC-FGFTRLCDLSV----GDMVEV--TLNGLIDFLLHYRR 935
                      ...:..|.|..|::.:. |.||.| |.|:    ||.::.  |.:.||...::.:.
plant   848 ----------CSLLLESPFSKVDLEALGFLFTHL-DFSMTSWEGDEIKAISTPSELIKQRVNLKD 901

  Fly   936 VLEKYPLLAYRRFWWKKQPDSRYQLLEPMLENKLALDYMPPNSVLKNFIFTAMTANESSVYAFGD 1000
            .||..||          .|.:|                                           
plant   902 DLEAIPL----------SPKNR------------------------------------------- 913

  Fly  1001 YFTYNMQETIEHRVIRSKILKKKTSLIEEMEDVSKQKLEIESVEVQTKSNAKSDVKVTTLLLLPE 1065
               .|:|.|.....||..:.:::   |:|.:|.:.......|:..|.|....:.::  |||.:  
plant   914 ---KNLQGTNIFEEIRKAVFEER---IQESKDRAAAIAWWNSLRCQRKPTYSTSLR--TLLTI-- 968

  Fly  1066 FPHRPRKPRKYVCEPLSMPRILYDL--------GQKVQAVHRYLYCDSRS-----AAWSQIRHNQ 1117
              ..|....|..|.......||.|:        .:.::.|..:.:....:     ..|       
plant   969 --KGPLDDLKANCSSYMYSSILADIVLSPIERFQKMIELVEAFTFAIPAARVPSPTCW------- 1024

  Fly  1118 CENSQG------------RELVSSGLALCKPHGGWSSIVVPDKETLITDAGKLFVLDNLLTRLKA 1170
            |..|..            .:|:|..|:..:|......:..||:..:..|.|||..|..||.:||.
plant  1025 CSKSDSPVFLSPSYKEKVTDLLSPLLSPIRPAIVRRQVYFPDRRLIQFDCGKLQELAMLLRKLKF 1089

  Fly  1171 NGHRVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGSSKISARRDMVADFQTRADIFVFLLSTRAGG 1235
            .|||.||::|||||:|:||.::....:.|||||||:....|:.::..|.|...||:|:||||:||
plant  1090 GGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTPPEERQTLMQRFNTNPKIFLFILSTRSGG 1154

  Fly  1236 LGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQ 1300
            :||||..|||||||||||||.:||||.||.||:|||::|.:||||.:.||||.||::|.:|..:.
plant  1155 VGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRVLD 1219

  Fly  1301 RMVISGGNFKPDTLKPKEVVSLLLDDEEIEMKYRQEAKLQSSSPIP---AATQSERKRRHPQKDV 1362
            .:||..|.:..:..|..:.:.|....:.:..|..:|......:.||   |..::..|:...:.|.
plant  1220 NLVIQNGEYNTEFFKKLDPMELFSGHKALTTKDEKETSKHCGADIPLSNADVEAALKQAEDEADY 1284

  Fly  1363 NMGGTTIAATSATQN----------PDDDVPSCSSAAKRIKLETEEDF-----IDVGITSSASSV 1412
             |....:....|..|          |:||           :|..|:|.     .|.|:.::.   
plant  1285 -MALKRVEQEEAVDNQEFTEEPVERPEDD-----------ELVNEDDIKADEPADQGLVAAG--- 1334

  Fly  1413 GTDSNHPTLSQETYVPGATCVQQTEIDSENEALVVDGDSPTMLGQNESMNFLDDL 1467
                           |....:.....|..:|..|:     |...|.:..:.|||:
plant  1335 ---------------PAKEEMSLLHSDIRDERAVI-----TTSSQEDDTDVLDDV 1369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ino80NP_732413.1 DBINO 313..438 CDD:290603 23/139 (17%)
SNF2_N 538..840 CDD:278600 138/301 (46%)
DEXDc 555..700 CDD:238005 72/144 (50%)
Helicase_C 1156..1269 CDD:278689 65/112 (58%)
PIE1NP_187887.3 HSA 36..106 CDD:214727 13/71 (18%)
HepA <529..1230 CDD:223627 284/814 (35%)
DEXQc_SRCAP 536..758 CDD:350761 109/227 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D188211at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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