DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ino80 and Ep400

DIOPT Version :9

Sequence 1:NP_732413.1 Gene:Ino80 / 42314 FlyBaseID:FBgn0086613 Length:1638 Species:Drosophila melanogaster
Sequence 2:XP_006535328.1 Gene:Ep400 / 75560 MGIID:1276124 Length:3169 Species:Mus musculus


Alignment Length:1824 Identity:380/1824 - (20%)
Similarity:655/1824 - (35%) Gaps:560/1824 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 GPKPPKQR--RRGRKKRDNMGSPESGEVPPSELGKYTFGDTLPNNEDDDEDGGEVDYKRELASLA 270
            ||.|.:..  .|.....:...||.:...|...:.......:...|....:||             
Mouse   714 GPSPARSSPVNRPSSATNKALSPITSRSPGVAVSAPPKPQSPAQNAASSQDG------------- 765

  Fly   271 LDYPEEEEIEEEVDVEGGTEGQVTKVRRK-----RKNPAAL-AARRRRIWQIMSKKESGRLQRIK 329
                .::::.|::.:|.....::..:|::     |:.|... |.|.:..|..:.::    :|.:.
Mouse   766 ----SQDKLAEQITLENQIHQRIADLRKEGLWSLRRLPKLQEAPRPKSHWDYLLEE----MQWMA 822

  Fly   330 SNNHKE---MLANCKRVAGMCAKVVRQRAINSQRIMKETVWRAKRL----TREMLAYWKRYERVE 387
            ::..:|   .||..|::....|:...::.:..:|..||...|.:|:    .||:..:|...|:| 
Mouse   823 TDFAQERRWKLAAAKKLVRTVARHHEEKKLREERGKKEEQSRLRRIAATTAREIEYFWSNIEQV- 886

  Fly   388 RDQRRKQEREAEEQRKQDVELIEVKR--QQRKLNFLITQTELYAHFM-------SKKLGQGSEED 443
              ...|.:.|.||:||:.:.|.:|.|  ::.:|....|..|   |.:       .:|......:|
Mouse   887 --VEIKLQVELEEKRKKALNLQKVSRRGKESRLKGFDTSPE---HSLDLGISGRKRKASTSLTDD 946

  Fly   444 QLRILSQLDEETNARLAAQDDYDAGEMKLLAQENAEAAMQRDLDKTRAFD-------VFAKKKEK 501
            ::....:..||..|.....|.:.  |:..||:| ||..:   :|..:.::       .:.:.:..
Mouse   947 EVEDEEETIEEEEAHEGLVDHHT--ELTNLAKE-AELPL---IDLMKLYEGAFLPNFQWPQPEPD 1005

  Fly   502 EEEEQAQESVEDIKPEPRPEMKD---------------------------------------LPQ 527
            .||...:|.|||. |..|...:|                                       ||:
Mouse  1006 HEESSGEEDVEDC-PSDRESRRDSVLIDSLFIMDQFKAAERMSIGKSNTKDITEVTAVAEAILPK 1069

  Fly   528 -------------PKMFKGTLKGYQIKGMTWLANIYDQGISGILADEMGLGKTVQSIAFLCHIAE 579
                         |.:..|.|:.||..|:.|||.:|.:.::||||||.|||||||.|||..|:|.
Mouse  1070 GSARVTTAVKFSAPSLLYGALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLAC 1134

  Fly   580 HYGVWGPFLVISPASTLHNWQQEMSRFVPDFKVVPYWGSPAERKILRQFWDQKHLHTRDASFHVV 644
            :.|.|||.||:..:..:..|:.|:.|:.|..|.:.|.||..|.|..||.|      |...:||:.
Mouse  1135 NEGNWGPHLVVMRSCNILKWELELKRWCPGLKTLSYVGSHRELKAKRQEW------TEPNNFHIC 1193

  Fly   645 ITSYQLVVSDYKYFNRIKWQYMVLDEAQAIKSAASQRWKLLLGFSCRNRLLLSGTPIQNSMAELW 709
            ||||:.....|..|:|:.|:.:|:||.|.:|....:.|:.:.....:.||||...|:.|:..|||
Mouse  1194 ITSYKQFFRGYTAFSRVHWKCLVVDEMQRVKGMTERHWEAIFKLQSQQRLLLIDVPLHNTFLELW 1258

  Fly   710 ALLHFIMPTLFDSHDEFNEWFSKDIESHAENKTGIDEKQISRLHMILKPFMLRRIKKDVENELSD 774
            .::||::|.:      ...:.|..:::..|.......|.:.|||.:.:||:|||.|:|||.:|:.
Mouse  1259 TMVHFLIPGI------SRPYLSFPLKAPNEENQDYYHKMVIRLHRVTQPFILRRTKRDVEKQLTR 1317

  Fly   775 KIEIMVYCPLTIRQKLLYRALKQKIRIEDLLHLTSGSTTTSSSSSASNLMNLVMQFRKVCNHPEL 839
            |.|.::.|.|:.|||.||..:..:.|.::.|          .|....::::::.:.:::||||.|
Mouse  1318 KYEHVLKCRLSSRQKALYEDVILQPRTQEAL----------KSGHFVSVLSVLTRLQRICNHPGL 1372

  Fly   840 FERRDARSPFFMRCAEYTIPRLIHEEGLIHRMLPSRKHLLYNRFNIFKSEYIQRSLFEDVNVNSC 904
            .|.|...|.|.....:|      ....||.|:|                   :|..:::.     
Mouse  1373 VEPRVPGSSFAAGSLQY------KSASLILRVL-------------------EREFWKET----- 1407

  Fly   905 FGFTRLCDLSVGDMVEVTLNGLIDFLLHY-----------RRVLEK-------------YPLLAY 945
                   |||:.|::     ||.:.:..:           |:::|:             ..|.|.
Mouse  1408 -------DLSIFDLI-----GLENKITRHEAELLCKKKVTRKLMEEVFASPPPSARPAAVKLKAS 1460

  Fly   946 RRF---WWKKQPDSRYQLL----EPMLENKLALDYMPPNSVLKNFIFTAMTANESSVYAFGDYFT 1003
            |.|   .:.::|:.|....    .|.:.|.......|...|.........:||..:..|...:  
Mouse  1461 RLFQPVQYGQKPEGRTVAFPSTHPPRMANTNTSTATPQGQVRGRPPIATFSANPDTKAAAAPF-- 1523

  Fly  1004 YNMQETI---EHRVIRSKI----------LKKKTSL----------------IEEMEDVSKQKLE 1039
            .|.|.::   .|:...:..          |:.:|::                :...:....|:|.
Mouse  1524 QNSQASVGAPRHQPTSTSSTAAGPAHPSKLRAQTAVQASTPGPPLPPPQAPSLVAGQSAPPQRLV 1588

  Fly  1040 IESVEVQTKSNAKSDVKVTTLLLL---------PEFP-------------H---------RPRKP 1073
            :.| :.|.:..:...||:..|..:         ||.|             |         :|.:.
Mouse  1589 LTS-QAQARLPSGEVVKIAQLASIAGPQSRVAQPETPVTLQFQGNKFTLSHSQLRQLTAGQPLQL 1652

  Fly  1074 RKYVCEPLSMP---------RILYDLGQKVQAVHRYLYCD------------------------- 1104
            :..|.:.:|.|         .::.....:..|||..|...                         
Mouse  1653 QGSVLQIVSAPGQPYLRAPGPVVMQTVSQAGAVHSTLGSKPPTSGPSPAPLTPQVGVPGRVAVSA 1717

  Fly  1105 -------------SRSAAWSQ----------------IRHNQCENS--QGREL------------ 1126
                         |.:|..:|                |...:|..:  .||:|            
Mouse  1718 MAVGEPGLASKPASPAAGPTQEEKSRLLKERLDQIHFINERRCSQAPVYGRDLLRICSLPGRRKR 1782

  Fly  1127 ----------------VSSGLALCKPHGG-------------------------------W---- 1140
                            |:..::|.|..|.                               |    
Mouse  1783 PLCWSLDSNFGKGPKGVNYDMSLSKSEGDLILTLSQESLQDVLGRVACVIPPVVATPPSLWVARP 1847

  Fly  1141 --------------------------------SSIVVPDKETLITDAGKLFVLDNLLTRLKANGH 1173
                                            .|:..|:...:..|:|||..|..||.:||:.|.
Mouse  1848 PSLYSSRLRALRQCLREHTGPYHRQLQQLTALRSLQFPELRLVQFDSGKLEALAILLQKLKSEGR 1912

  Fly  1174 RVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGSSKISARRDMVADFQTRADIFVFLLSTRAGGLGI 1238
            ||||.|||..|:|:||.::......|:|:|.::....|::::..|.....||..||||.:...||
Mouse  1913 RVLILSQMVLMLDILEMFLNFHYLTYVRIDENANSEQRQELMRSFNRDRRIFCALLSTHSRATGI 1977

  Fly  1239 NLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMV 1303
            ||..||||:|||:|.||.:|.:|.:...|:|:.|.:.:|||:...:|||::|:.. .|..|:.:.
Mouse  1978 NLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKDIHIYRLVSGNSIEEKLLKNG-TKDLIREVA 2041

  Fly  1304 ISGGNFKPDTLKPKEVVSLL-----LDDEEIEMKYRQEAKLQS------------SSPIPAATQS 1351
            ..|.::....|..:.:..|.     :||....:|..:...|..            :.|...|.:|
Mouse  2042 AQGNDYSMAFLTQRTIQELFEVYSPMDDTGFPVKAEEFVVLSQEPSVSETIAPKIARPFIEALKS 2106

  Fly  1352 ----ERKRRHPQKDVNMGGTTIAATSATQNPD-DDVPSCSSAAKRIKLETEEDFID--VGITSSA 1409
                |...:...::...|.:::|.:|.:.... |:.||        :||...||::  ..|...|
Mouse  2107 IECLEEDAQRSTEEAVPGSSSVAVSSDSDGSRYDEEPS--------QLEELADFMEQLTPIEKYA 2163

  Fly  1410 SSVGTDSNHPTLSQETYVPGATCVQQTEIDSE--NEALVVDGDSPTMLGQNE------------S 1460
            .:. .:..|.|..||........|..:..|.|  |...:.:.::...|.|.|            :
Mouse  2164 LNY-LELFHTTTEQEKERISEDLVMASMKDWETRNARALQEREARLQLEQEEAELLTYTREDAYT 2227

  Fly  1461 MNFL-DDLSG---ISPMRRRHHPRGTRRGRPRGSTRRGGGHGSIPRVLTPTQAATPAVPATASQA 1521
            |.:: :|..|   :.|:                              .||     |..|...:..
Mouse  2228 MEYVYEDADGQTEVMPL------------------------------WTP-----PTPPQDDNDI 2257

  Fly  1522 AAAGTGAAAGTSSPLPQQEVSGGGDNAGVPLH----EEEYRTSPSGQSPGVSCKRGPGR----PR 1578
            ...........::|:|:.::.        |::    .:.::|.||  :.|...|:..|.    ||
Mouse  2258 YIDSVMCLMYETTPIPEAKLP--------PVYVRKERKRHKTDPS--AAGRKKKQRHGEAVVPPR 2312

  Fly  1579 SKTATPISRGTRGAPRARR------------PMGPLLVPLGRSPDDTPPSSSPATSRAPSPLSGS 1631
            |.    ..|.|.|..:.||            ...|...||   |.....|..||.. :|..|.|.
Mouse  2313 SL----FDRATPGMLKIRREGKEQKKNLLLKQQTPFAKPL---PTYVKSSGEPAQD-SPDWLIGE 2369

  Fly  1632 HGAV 1635
            ..|:
Mouse  2370 DWAL 2373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ino80NP_732413.1 DBINO 313..438 CDD:290603 31/140 (22%)
SNF2_N 538..840 CDD:278600 105/301 (35%)
DEXDc 555..700 CDD:238005 58/144 (40%)
Helicase_C 1156..1269 CDD:278689 48/112 (43%)
Ep400XP_006535328.1 EP400_N 1..506 CDD:374114
Atrophin-1 455..>752 CDD:367360 7/37 (19%)
HSA 799..870 CDD:214727 15/74 (20%)
Rrp15p 833..921 CDD:369577 24/90 (27%)
DEAD-like_helicase_N 1090..1306 CDD:391939 83/227 (37%)
PHA03247 <1443..1744 CDD:223021 40/303 (13%)
SF2_C_SNF 1894..2019 CDD:350180 52/124 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D188211at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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