DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ino80 and Ep400

DIOPT Version :10

Sequence 1:NP_732413.1 Gene:Ino80 / 42314 FlyBaseID:FBgn0289122 Length:1638 Species:Drosophila melanogaster
Sequence 2:NP_083613.2 Gene:Ep400 / 75560 MGIID:1276124 Length:3035 Species:Mus musculus


Alignment Length:1749 Identity:381/1749 - (21%)
Similarity:647/1749 - (36%) Gaps:491/1749 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 GPKPPKQR--RRGRKKRDNMGSPESGEVPPSELGKYTFGDTLPNNEDDDEDGGEVDYKRELASLA 270
            ||.|.:..  .|.....:...||.:...|...:.......:...|....:||             
Mouse   677 GPSPARSSPVNRPSSATNKALSPITSRSPGVAVSAPPKPQSPAQNAASSQDG------------- 728

  Fly   271 LDYPEEEEIEEEVDVEGGTEGQVTKVRRK-----RKNPAAL-AARRRRIWQIMSKKESGRLQRIK 329
                .::::.|::.:|.....::..:|::     |:.|... |.|.:..|..:.::    :|.:.
Mouse   729 ----SQDKLAEQITLENQIHQRIADLRKEGLWSLRRLPKLQEAPRPKSHWDYLLEE----MQWMA 785

  Fly   330 SNNHKE---MLANCKRVAGMCAKVVRQRAINSQRIMKETVWRAKRL----TREMLAYWKRYERVE 387
            ::..:|   .||..|::....|:...::.:..:|..||...|.:|:    .||:..:|...|:| 
Mouse   786 TDFAQERRWKLAAAKKLVRTVARHHEEKKLREERGKKEEQSRLRRIAATTAREIEYFWSNIEQV- 849

  Fly   388 RDQRRKQEREAEEQRKQDVELIEVKR--QQRKLNFLITQTELYAHFM-------SKKLGQGSEED 443
              ...|.:.|.||:||:.:.|.:|.|  ::.:|....|..|   |.:       .:|......:|
Mouse   850 --VEIKLQVELEEKRKKALNLQKVSRRGKESRLKGFDTSPE---HSLDLGISGRKRKASTSLTDD 909

  Fly   444 QLRILSQLDEETNARLAAQDDYDAGEMKLLAQENAEAAMQRDLDKTRAFD-------VFAKKKEK 501
            ::....:..||..|.....|.:.  |:..||:| ||..:   :|..:.::       .:.:.:..
Mouse   910 EVEDEEETIEEEEAHEGLVDHHT--ELTNLAKE-AELPL---IDLMKLYEGAFLPNFQWPQPEPD 968

  Fly   502 EEEEQAQESVEDIKPEPRPEMKD---------------------------------------LPQ 527
            .||...:|.|||. |..|...:|                                       ||:
Mouse   969 HEESSGEEDVEDC-PSDRESRRDSVLIDSLFIMDQFKAAERMSIGKSNTKDITEVTAVAEAILPK 1032

  Fly   528 -------------PKMFKGTLKGYQIKGMTWLANIYDQGISGILADEMGLGKTVQSIAFLCHIAE 579
                         |.:..|.|:.||..|:.|||.:|.:.::||||||.|||||||.|||..|:|.
Mouse  1033 GSARVTTAVKFSAPSLLYGALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLAC 1097

  Fly   580 HYGVWGPFLVISPASTLHNWQQEMSRFVPDFKVVPYWGSPAERKILRQFWDQKHLHTRDASFHVV 644
            :.|.|||.||:..:..:..|:.|:.|:.|..|.:.|.||..|.|..||.|      |...:||:.
Mouse  1098 NEGNWGPHLVVMRSCNILKWELELKRWCPGLKTLSYVGSHRELKAKRQEW------TEPNNFHIC 1156

  Fly   645 ITSYQLVVSDYKYFNRIKWQYMVLDEAQAIKSAASQRWKLLLGFSCRNRLLLSGTPIQNSMAELW 709
            ||||:.....|..|:|:.|:.:|:||.|.:|....:.|:.:.....:.||||...|:.|:..|||
Mouse  1157 ITSYKQFFRGYTAFSRVHWKCLVVDEMQRVKGMTERHWEAIFKLQSQQRLLLIDVPLHNTFLELW 1221

  Fly   710 ALLHFIMPTLFDSHDEFNEWFSKDIESHAENKTGIDEKQISRLHMILKPFMLRRIKKDVENELSD 774
            .::||::|.:      ...:.|..:::..|.......|.:.|||.:.:||:|||.|:|||.:|:.
Mouse  1222 TMVHFLIPGI------SRPYLSFPLKAPNEENQDYYHKMVIRLHRVTQPFILRRTKRDVEKQLTR 1280

  Fly   775 KIEIMVYCPLTIRQKLLYRALKQKIRIEDLLHLTSGSTTTSSSSSASNLMNLVMQFRKVCNHPEL 839
            |.|.::.|.|:.|||.||..:..:.|.::.|          .|....::::::.:.:::||||.|
Mouse  1281 KYEHVLKCRLSSRQKALYEDVILQPRTQEAL----------KSGHFVSVLSVLTRLQRICNHPGL 1335

  Fly   840 FERRDARSPFFMRCAEY----TIPRLIHEE-------------GLIHRMLPSRKHLLYNRFNIFK 887
            .|.|...|.|.....:|    .|.|::..|             ||.:::......||..:     
Mouse  1336 VEPRVPGSSFAAGSLQYKSASLILRVLEREFWKETDLSIFDLIGLENKITRHEAELLCKK----- 1395

  Fly   888 SEYIQRSLFEDV----------------------------------------------NVNSCFG 906
              .:.|.|.|:|                                              |.|:...
Mouse  1396 --KVTRKLMEEVFASPPPSARPAAVKLKASRLFQPVQYGQKPEGRTVAFPSTHPPRMANTNTSTA 1458

  Fly   907 --------------FTRLCDLSVGDMVEVTLNGLIDFLLHYRRVLEKYPLLAYRRFWWKKQPDSR 957
                          |:...|...|::|::.....|                        ..|.||
Mouse  1459 TPQGQVRGRPPIATFSANPDTKGGEVVKIAQLASI------------------------AGPQSR 1499

  Fly   958 YQLLEPMLENKLALDYMPPNSVLKNFIFTAMTANE---------SSVYAFGDYFTYN----MQET 1009
              :.:|  |..:.|.:......|.:.....:||.:         ..|.|.|..:...    :.:|
Mouse  1500 --VAQP--ETPVTLQFQGNKFTLSHSQLRQLTAGQPLQLQGSVLQIVSAPGQPYLRAPGPVVMQT 1560

  Fly  1010 IE-----HRVIRSK--------------------------------ILKKKTS-----LIEEMED 1032
            :.     |..:.||                                :..|..|     ..||...
Mouse  1561 VSQAGAVHSTLGSKPPTSGPSPAPLTPQVGVPGRVAVSAMAVGEPGLASKPASPAAGPTQEEKSR 1625

  Fly  1033 VSKQKL-EIESVEVQTKSNAKSDVKVTTLLLLPEFPHRPRKPRKYVCEPLSM-----PR-ILYDL 1090
            :.|::| :|..:..:..|.|  .|....||.:...|.|.::|   :|..|..     |: :.||:
Mouse  1626 LLKERLDQIHFINERRCSQA--PVYGRDLLRICSLPGRRKRP---LCWSLDSNFGKGPKGVNYDM 1685

  Fly  1091 G--------------QKVQAVHRYLYC---------------------DSRSAAWSQI--RHNQC 1118
            .              :.:|.|...:.|                     .||..|..|.  .|...
Mouse  1686 SLSKSEGDLILTLSQESLQDVLGRVACVIPPVVATPPSLWVARPPSLYSSRLRALRQCLREHTGP 1750

  Fly  1119 ENSQGRELVSSGLALCKPHGGWSSIVVPDKETLITDAGKLFVLDNLLTRLKANGHRVLIYSQMTK 1183
            .:.|.::|.:           ..|:..|:...:..|:|||..|..||.:||:.|.||||.|||..
Mouse  1751 YHRQLQQLTA-----------LRSLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMVL 1804

  Fly  1184 MIDLLEEYMWHRKHRYMRLDGSSKISARRDMVADFQTRADIFVFLLSTRAGGLGINLTAADTVIF 1248
            |:|:||.::......|:|:|.::....|::::..|.....||..||||.:...||||..||||:|
Mouse  1805 MLDILEMFLNFHYLTYVRIDENANSEQRQELMRSFNRDRRIFCALLSTHSRATGINLVEADTVVF 1869

  Fly  1249 YDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISGGNFKPDT 1313
            ||:|.||.:|.:|.:...|:|:.|.:.:|||:...:|||::|:.. .|..|:.:...|.::....
Mouse  1870 YDNDLNPVMDAKAQEWCDRIGRCKDIHIYRLVSGNSIEEKLLKNG-TKDLIREVAAQGNDYSMAF 1933

  Fly  1314 LKPKEVVSLL-----LDDEEIEMKYRQEAKLQS------------SSPIPAATQS----ERKRRH 1357
            |..:.:..|.     :||....:|..:...|..            :.|...|.:|    |...:.
Mouse  1934 LTQRTIQELFEVYSPMDDTGFPVKAEEFVVLSQEPSVSETIAPKIARPFIEALKSIECLEEDAQR 1998

  Fly  1358 PQKDVNMGGTTIAATSATQNPD-DDVPSCSSAAKRIKLETEEDFID--VGITSSASSVGTDSNHP 1419
            ..::...|.:::|.:|.:.... |:.||        :||...||::  ..|...|.:. .:..|.
Mouse  1999 STEEAVPGSSSVAVSSDSDGSRYDEEPS--------QLEELADFMEQLTPIEKYALNY-LELFHT 2054

  Fly  1420 TLSQETYVPGATCVQQTEIDSE--NEALVVDGDSPTMLGQNE------------SMNFL-DDLSG 1469
            |..||........|..:..|.|  |...:.:.::...|.|.|            :|.:: :|..|
Mouse  2055 TTEQEKERISEDLVMASMKDWETRNARALQEREARLQLEQEEAELLTYTREDAYTMEYVYEDADG 2119

  Fly  1470 ---ISPMRRRHHPRGTRRGRPRGSTRRGGGHGSIPRVLTPTQAATPAVPATASQAAAAGTGAAAG 1531
               :.|:                              .||     |..|...:............
Mouse  2120 QTEVMPL------------------------------WTP-----PTPPQDDNDIYIDSVMCLMY 2149

  Fly  1532 TSSPLPQQEVSGGGDNAGVPLH----EEEYRTSPSGQSPGVSCKRGPGR----PRSKTATPISRG 1588
            .::|:|:.::.        |::    .:.::|.||  :.|...|:..|.    |||.    ..|.
Mouse  2150 ETTPIPEAKLP--------PVYVRKERKRHKTDPS--AAGRKKKQRHGEAVVPPRSL----FDRA 2200

  Fly  1589 TRGAPRARR------------PMGPLLVPLGRSPDDTPPSSSPATSRAPSPLSGSHGAV 1635
            |.|..:.||            ...|...||   |.....|..||.. :|..|.|...|:
Mouse  2201 TPGMLKIRREGKEQKKNLLLKQQTPFAKPL---PTYVKSSGEPAQD-SPDWLIGEDWAL 2255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ino80NP_732413.1 HepA 364..>855 CDD:440319 158/562 (28%)
DEXQc_INO80 535..763 CDD:350760 83/227 (37%)
SF2_C_SNF 1146..1280 CDD:350180 54/133 (41%)
PHA03247 <1535..1637 CDD:223021 28/121 (23%)
Ep400NP_083613.2 EP400_N 1..451 CDD:434938
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..55
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 125..149
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 222..250
Atrophin-1 <446..>718 CDD:460830 7/40 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 448..482
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 507..564
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 598..732 10/71 (14%)
HSA 762..833 CDD:214727 15/74 (20%)
HepA 815..>1336 CDD:440319 155/555 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 877..915 6/40 (15%)
Interactions with RUVBL1 and RUVBL2. /evidence=ECO:0000250 913..1327 126/442 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 960..987 8/27 (30%)
DEAD-like_helicase_N 1053..1269 CDD:475120 83/227 (37%)
DEAD box-like 1181..1184 2/2 (100%)
PHA03247 <1407..1626 CDD:223021 27/246 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1436..1466 2/29 (7%)
SF2_C_SNF 1776..1901 CDD:350180 52/124 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1996..2025 4/28 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2166..2190 6/25 (24%)
Interaction with ZNF42. /evidence=ECO:0000269|PubMed:12653961 2403..2662
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2404..2497
Chi1 2497..>2638 CDD:442692
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2697..2753
SP1-4_N <2815..3027 CDD:425404
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2991..3035
Blue background indicates that the domain is not in the aligned region.

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