DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ino80 and ep400

DIOPT Version :9

Sequence 1:NP_732413.1 Gene:Ino80 / 42314 FlyBaseID:FBgn0086613 Length:1638 Species:Drosophila melanogaster
Sequence 2:XP_009302476.1 Gene:ep400 / 562355 ZFINID:ZDB-GENE-081104-186 Length:3109 Species:Danio rerio


Alignment Length:2101 Identity:426/2101 - (20%)
Similarity:711/2101 - (33%) Gaps:802/2101 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 MAEPLHIQRLEAALNMRPFMNMAKRS-------LRK---PLSSDEETDDE-HVVKREHDVQDSDD 69
            :.|...:|.|:.  ||..::...|:.       ||:   .|..:||.::: .|:..|..|....|
Zfish   382 LIELFFLQHLQG--NMMDYIAFKKKPCVPLFTYLRQNDLDLEDEEEEEEQSEVINDEVKVVTGKD 444

  Fly    70 SSTVGVVRMKQSSKRKSRLLASKEERQSVKAQLYNFNDLTSDREWLYDLLLSDTESDDPTITEDE 134
            ..||..|                    ::..||                        .|.::...
Zfish   445 GQTVTPV--------------------AIATQL------------------------PPNVSAAF 465

  Fly   135 YVQQLLREHVREQRQRKNYYKKAANAQYAYYGSGLLSNH-DIFA-ERQLATAGVRKRRRRTKQEI 197
            ..||..:.|                   |...||.:||. |:.| :||.|.|.. .:.:|::.|:
Zfish   466 STQQQFQTH-------------------AGVASGSISNPVDMEAFKRQQAMAQA-DQAKRSRMEV 510

  Fly   198 ---------------------LMARLAEAQAG--PKPPKQRRRGRKKRDNMGSPESG-------- 231
                                 |...:..||.|  |.|...:..|:|:......|..|        
Zfish   511 GRHGMIFQHPAVTPLGSPGVPLQQLMPTAQGGMPPTPQTVQIGGQKQNQQQYDPSKGPPVQNAAS 575

  Fly   232 -EVPPSEL-GK---------YTFGDTLPNNEDDDEDGGEVDYKRELA------------------ 267
             ..||.:| |:         ...|..:..::.....||::..|.:.|                  
Zfish   576 LHTPPPQLPGRLPQAGLPLSLAQGQAMVVDQQATVTGGQLQVKVQGAGAVLAPVNPHAQLQAQLQ 640

  Fly   268 ----SLALDYPEEEEIEEEVDVEGGTEGQVTKVRRKRKNPAALAARRRRIWQIMSKKESGRLQRI 328
                .|.|...:::::::.|...|  :..||.:|     |.|              :.|...||:
Zfish   641 QMQSGLHLQMQQQQQMQQSVMQPG--QATVTLLR-----PGA--------------ETSQAAQRL 684

  Fly   329 KSNN--------------------------------------HKEMLANCKRVAGMCAKVVRQRA 355
            .||:                                      .:..|.......|:....:.|.:
Zfish   685 MSNSLSSPVISSVPLTSPSSLPSPLTSAPVRTPNTGPSLSPVAQSKLTATNGTVGLKLSSLGQSS 749

  Fly   356 I--NSQ----------------------RIMKETVWRAKRLTR---------------EMLAY-- 379
            |  |||                      .:.||..|.|.||.:               |.:.:  
Zfish   750 IGQNSQESSQDKQAEQAKLESHVHQRIAELRKEGQWSASRLPKLQESCRPKSQWDYLLEEMQWMA 814

  Fly   380 --------WK------------RYERVERDQRRKQEREAEEQRKQDV----------------EL 408
                    ||            || .||:.:..::|::.||.|.:.:                ::
Zfish   815 ADFAQERRWKMAAAKKLVRTCARY-HVEKKKMGEREKKEEEMRLRHIASTIARGVDYFWSNIEQI 878

  Fly   409 IEVKR------QQRKLNFLITQTELYAHFMSKKLGQGSEEDQLR------------ILSQLD--- 452
            :|:|.      :|:|   ::...:..:.....|.||.|:::..|            .||.::   
Zfish   879 VEIKHHFEIYDKQKK---VLCLQKASSKGQCAKSGQSSDKESKRETGPSRKRKSSTSLSDVEVED 940

  Fly   453 -----EETNARLAAQDDYDAGEMKLLAQENAEAAMQRDLDKTRAFDVFAK-----KKEKEEEEQA 507
                 ||..|..||.|  ...|:..|.:| ||..:. ||.|..| ..:|:     :...:.|::.
Zfish   941 EESTIEEQEATEAAAD--QKAELAELTKE-AEVPLD-DLVKQYA-GAYAEGFEWPQPSSQSEDED 1000

  Fly   508 QESVEDIK------------------------------PEPRPEMKDLPQ--------------- 527
            :|..||:.                              |:.:| .||:.:               
Zfish  1001 REEAEDMNTPLDSPHDAVLIDSLLSMDQYRGAERTTSGPDGKP-TKDIAEVAAATDLILPKGSAR 1064

  Fly   528 ---------PKMFKGTLKGYQIKGMTWLANIYDQGISGILADEMGLGKTVQSIAFLCHIAEHYGV 583
                     |.:..|:|:.||..|:.|||:::.:.::||||||.|||||||::|:..|:|.:.|:
Zfish  1065 TTLTSRSSPPSLLHGSLREYQQVGVEWLASLHRKNLNGILADETGLGKTVQTVAYFAHLACNQGI 1129

  Fly   584 WGPFLVISPASTLHNWQQEMSRFVPDFKVVPYWGSPAERKILRQFWDQKHLHTRDASFHVVITSY 648
            |||.||:.....|.||:.|..|:.|..|::.|.||..:|:..|..|.:.:      :|||.:|||
Zfish  1130 WGPHLVVVRTCKLLNWEMEFKRWCPGLKILLYLGSRRQRRYKRSRWCEPN------NFHVCVTSY 1188

  Fly   649 QLVVSDYKYFNRIKWQYMVLDEAQAIKSAASQRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLH 713
            :|::.|..:|.|.:|:::||||.|.||:...:.|:.:.....:.|:||..||:||::.|||.::|
Zfish  1189 KLLLKDQSHFLRRRWKHLVLDEVQLIKNMTEKHWETIFNIKSQQRILLINTPLQNTLKELWTMIH 1253

  Fly   714 FIMPTLFDSHDEFNEWFSKDIESHAENKTGIDEKQ------ISRLHMILKPFMLRRIKKDVENEL 772
            |::|.:  :|...|          ...|.|.|:.|      :.|||.:::||:|||.|:|||.::
Zfish  1254 FLLPGI--THPYLN----------FPIKPGTDQNQDYCHKLVIRLHRMIQPFILRRSKRDVEKQM 1306

  Fly   773 SDKIEIMVYCPLTIRQKLLYRALKQKIRIEDLLHLTSGSTTTSSSSSASNLMNLVMQFRKVCNHP 837
            ..|.|.::.|.|:.|||.:|         ||:|...|......:.... .::.::||.:|:||||
Zfish  1307 PKKYEHILKCRLSKRQKSMY---------EDILIQPSAQEALKTGHFV-RVLEVLMQLQKICNHP 1361

  Fly   838 ELFERRDARSPFFMRCAEYTIPR--------------------LIHEEGLIHR-----MLPS--- 874
            :|.:.||..:.:..:..:|..|.                    ||:.||.:.|     .||.   
Zfish  1362 DLIQPRDTHNSYVCQPLQYNTPSLLLNALQQDQWKTVDLSLFDLINNEGKLTRYEAEEALPKIRM 1426

  Fly   875 RKHLLYNRFN------------------IFKSEY------------------------------- 890
            .|.|:...:|                  ....:|                               
Zfish  1427 TKQLIEEIYNARDPPARPRPCKIKPMRLFLPVQYGTKPEGRLVPMTSSTTQAPRTTTVTTAPTTT 1491

  Fly   891 ----------------------------------------------------------------- 890
                                                                             
Zfish  1492 TNSVTAVSNTQPRGKSPLTTTPSAQASIINCSSGPLLTGAIPNPPSIPLSMGVPGVTTMPAVTPQ 1556

  Fly   891 ------IQRSLFEDVNVNSCFGFTRLCDLSVGDMVEVTLNGLIDFLLHYRRVLE-KYPLLAYRRF 948
                  :|.||.....|.|.....|   |..||:|:|..      |:...|:.: :.|:..  :|
Zfish  1557 APSPVPLQPSLVSQRLVLSSQAQAR---LPSGDVVKVAQ------LVGQSRIAQPETPVTL--QF 1610

  Fly   949 WWKKQPDSRYQL----------LEPMLENKLALDYMPPNSVLK--------NFIFTAMTANESS- 994
            ...|...|:.||          |:..|.|.|.:...|...:|:        ..:..|:.|..|| 
Zfish  1611 QGNKFTLSQSQLRQLTTGQPLQLQGTLGNILQIVSAPGQPLLRPQGPPMVMPTVPQAVPAQNSSG 1675

  Fly   995 --------------------VYAFGDYFT-------YNMQETIEHRVIRSKILKKK-TSLIEEME 1031
                                ..|..|..|       ...||:.|.   |::.||:: :||....|
Zfish  1676 TPPPATSTPPQANTMASTTVTPANTDMETNAKHSNNSTSQESSEE---RNRQLKERLSSLFHANE 1737

  Fly  1032 DVSKQKL----------------------------------------------EIESVEVQTKSN 1050
            ..|.:.:                                              .:.|:.....||
Zfish  1738 RRSSRSVLYGSDLVKTCSVYEGRPPPAFPAPQHSRWSWVGRDSCIRAQQTCVSTVASLRSAILSN 1802

  Fly  1051 AKSDVKVTTLL-----LLPEFPHRPRKPRKYVCEPLSMPRILYDLGQKVQAVHRYLYCDSRSAAW 1110
            .:.:...:|||     :||.....|  |:.|.|.|...    |.|.||  :..|.|  ...||.:
Zfish  1803 TEQEAAASTLLKRFSWILPAAVAPP--PQLYACNPPPS----YSLAQK--SFRRQL--QEASAPF 1857

  Fly  1111 SQIRHNQCENSQGRELVSSGLALCKPHGGWSSIVVPDKETLITDAGKLFVLDNLLTRLKANGHRV 1175
                     |::.|:|.      |.|...:     ||...|..|:|||..|..||.:|.|...||
Zfish  1858 ---------NAEIRKLA------CPPVASF-----PDAHMLEMDSGKLEALSILLQKLSAENRRV 1902

  Fly  1176 LIYSQMTKMIDLLEEYMWHRKHRYMRLDGSSKISARRDMVADFQTRADIFVFLLSTRAGGLGINL 1240
            ||::||..|:|:||.::.||...|:|||.|..:..|::.|..:.....||..:|:.|......::
Zfish  1903 LIFTQMASMLDILESFLDHRHLTYVRLDESLSLEERQEQVKKYNRNRQIFCTILTNRCCSAMGHV 1967

  Fly  1241 TAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVIS 1305
            ..|||::|||:|.||::|.:..:...::|::|.:.:|||....:|||::|:.. .|..|:.:...
Zfish  1968 FDADTIVFYDTDLNPSMDMRTQEWCDKIGRSKDIHIYRLESGNSIEEKLLKNG-TKDLIREVAAQ 2031

  Fly  1306 GGNFKPDTLKPKEVVSLLLDD-------EEIEMKYRQEAKLQSSSP---IPAATQSERKRRHPQK 1360
            |.::....|..:.:..|...:       ||..:.:::.:..:|..|   .|........|:..|.
Zfish  2032 GMDYTLAFLTQRTIQDLFEVEAGSGEKVEEFVVLHQEPSPSESIPPHVARPYIQALNTIRQETQY 2096

  Fly  1361 DVNMGGTTIAATSATQNPDDDVPS-CSSAAKRIKLETEEDFIDVGITSSASS------------- 1411
            :...|...:         |:||.| ...|...::::.||     |.....|.             
Zfish  2097 EEEEGQVEV---------DEDVKSDKEKAGGPVEMDIEE-----GAREETSQLEELAAVMEQLTP 2147

  Fly  1412 -------------VGTDSNHPTLSQETYVPGATCVQQTEIDSENEALVVDGDSPTML-------- 1455
                         :..|........||...|.....|.::..|.|..::..|...:|        
Zfish  2148 IERYALHYLEYLHISEDEQVVKERMETTKRGWELQLQQKLKVEKEEQMIQEDEEDLLSYTREDAY 2212

  Fly  1456 ----------GQNESMN--------------FLDDL------------SGISPM----RRRHHPR 1480
                      ||.|.|.              ::|.:            |.:.|:    .|:.|..
Zfish  2213 NMEYVFENEDGQTEIMPLWTPPTPPQDDNDIYIDSVICLMYDTAPMPESKLPPVYVRKERKRHMD 2277

  Fly  1481 GTRRGRPRGSTRRGGGHGSIP 1501
            .:..||.:   ::|.|...||
Zfish  2278 PSALGRKK---KKGHGESVIP 2295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ino80NP_732413.1 DBINO 313..438 CDD:290603 34/245 (14%)
SNF2_N 538..840 CDD:278600 110/307 (36%)
DEXDc 555..700 CDD:238005 57/144 (40%)
Helicase_C 1156..1269 CDD:278689 41/112 (37%)
ep400XP_009302476.1 EP400_N 1..493 CDD:292418 31/175 (18%)
HSA 791..>839 CDD:214727 5/48 (10%)
SNF2_N 1084..1364 CDD:278600 110/307 (36%)
DEXDc 1101..1236 CDD:238005 55/140 (39%)
SOBP <1499..>1663 CDD:291927 25/174 (14%)
Helicase_C 1882..1986 CDD:278689 40/103 (39%)
BAH 2151..2296 CDD:295389 24/148 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D188211at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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