DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ino80 and Hel89B

DIOPT Version :9

Sequence 1:NP_732413.1 Gene:Ino80 / 42314 FlyBaseID:FBgn0086613 Length:1638 Species:Drosophila melanogaster
Sequence 2:NP_001287351.1 Gene:Hel89B / 41943 FlyBaseID:FBgn0022787 Length:1923 Species:Drosophila melanogaster


Alignment Length:946 Identity:231/946 - (24%)
Similarity:348/946 - (36%) Gaps:350/946 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   401 QRKQDVELIE--VKRQQRK-LNFLITQTELYAHFMSKKLGQGSEEDQ-LRILSQLDEETNARLAA 461
            :|:..:|.||  |.|.|.| :.:::.       .:...||..|:.|: :|:||........:|..
  Fly  1247 ERQGAIEAIERVVSRLQIKVVPYIVL-------LVVPLLGAMSDPDESVRLLSTHCFANLVQLMP 1304

  Fly   462 QDDYDAGEMKLLAQENAEAAMQRDLDKTRAFDVFAKKKEKEEEEQAQESVEDIKPEPRPEMKDLP 526
            .|    |:.:.|..:..:|...||    |.|..:.                 ..|:..|..| :|
  Fly  1305 LD----GKTEQLKSDPLQARKTRD----REFLDYL-----------------FNPKSIPNYK-VP 1343

  Fly   527 QPKMFKGTLKGYQIKGMTWLANIYDQGISGILADEMGLGKTVQSIAFLCHIAEHYGVWG----PF 587
            .|  ....|:.||..|:.||..:....:.|||.|:||||||:|:|..|.....|.....    |.
  Fly  1344 VP--ISVELRCYQQAGINWLWFLNKYNLHGILCDDMGLGKTLQTICILAGDHMHRQTANLANLPS 1406

  Fly   588 LVISPASTLHNWQQEMSRFVPDFKV---VPYWGSPAERKILRQFWDQKHLHTRDASFHVVITSYQ 649
            |||.|.:...:|..|:.:|:....|   :.|:|.|..|:.||.....|        .::|:.||.
  Fly  1407 LVICPPTLTGHWVYEVEKFLDQGSVLRPLHYYGFPVGREKLRSDIGTK--------CNLVVASYD 1463

  Fly   650 LVVSDYKYFNRIKWQYMVLDEAQAIKSAASQRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHF 714
            .|..|..:|:.|.:.|.||||...||:..::..|.:......:||:||||||||::.|||:|..|
  Fly  1464 TVRKDIDFFSGIHFNYCVLDEGHIIKNGKTKSSKAIKRLKANHRLILSGTPIQNNVLELWSLFDF 1528

  Fly   715 IMPTLFDSHDEFNEWFSKDIESHAENKTGIDEKQ-----ISRLHMILKPFMLRRIKKDVENELSD 774
            :||....:..:|.:.||:.|.|..:.|:...|::     :..||..:.||:|||:|:||..:|..
  Fly  1529 LMPGFLGTEKQFVQRFSRPILSSRDAKSSAKEQEAGVLAMEALHRQVLPFLLRRVKEDVLKDLPP 1593

  Fly   775 KIEIMVYCPLTIRQKLLYRALKQKIRIEDLL----HLTSGSTTTSSSSSASNLMNLVMQFRKVCN 835
            ||...:.|.|:..|..||.....| .::|.|    ..:|.|..|.:.|:.:::...:...:.|||
  Fly  1594 KITQDLLCELSPLQLRLYEDFSNK-HLKDCLDKLGDSSSASMVTENLSAKTHIFQALRYLQNVCN 1657

  Fly   836 HPELFERRDARSPFFMRCAEYTIPRLIHEEGLIHRMLPSRKHLLYNRFNIFKSEYIQRSLFEDVN 900
            ||:|..|                                            :||           
  Fly  1658 HPKLVLR--------------------------------------------QSE----------- 1667

  Fly   901 VNSCFGFTRLCDLSVGDMVEVTLNGLIDFLLHYRRVLEKYPLLAYRRFWWKKQPDSRYQLLEPML 965
                            ::.:||                                           
  Fly  1668 ----------------ELTKVT------------------------------------------- 1673

  Fly   966 ENKLALDYMPPNSVLKNFIFTAMTANESSVYAFGDYFTYNMQETIEHRVIRSKILKKKTSLIEEM 1030
             ::|||.    ||.|                           :.|||                  
  Fly  1674 -SQLALS----NSSL---------------------------DDIEH------------------ 1688

  Fly  1031 EDVSKQKLEIESVEVQTKSNAKSDVKVTTLLLLPEFPHRPRKPRKYVCEPLSMPRILYDLGQKVQ 1095
                               :||          ||                 ::.::|.|.|..||
  Fly  1689 -------------------SAK----------LP-----------------ALKQLLLDCGIGVQ 1707

  Fly  1096 AVHRYLYCDSRSAAWSQIRHNQCENSQGRELVSSGLALCKPHGGWSSIVVPDKETLITDAGKLFV 1160
            .                            |.||.                               
  Fly  1708 T----------------------------ESVSQ------------------------------- 1713

  Fly  1161 LDNLLTRLKANGHRVLIYSQMTKMIDLLEEYMWHRKH----RYMRLDGSSKISARRDMVADFQTR 1221
                        ||.||:.|:..|:|::|:.:. |:|    .|:|||||...|.|:|:|.:|.:.
  Fly  1714 ------------HRALIFCQLKAMLDIVEQDLL-RRHLPSVTYLRLDGSVPASQRQDIVNNFNSD 1765

  Fly  1222 ADIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIE 1286
            ..|.|.||:|..||||:|||.||||||.:.||||..|.||||||||:||.|.|.|||||.:.::|
  Fly  1766 PSIDVLLLTTMVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRNSLE 1830

  Fly  1287 ERILQRAREKSEIQRMVISGGNFKPDTLKPKEVVSL 1322
            |:|:...:.|......|:|..|....|:...::..|
  Fly  1831 EKIMGLQKFKILTANTVVSAENASLQTMGTSQIFDL 1866

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ino80NP_732413.1 DBINO 313..438 CDD:290603 9/39 (23%)
SNF2_N 538..840 CDD:278600 104/317 (33%)
DEXDc 555..700 CDD:238005 50/151 (33%)
Helicase_C 1156..1269 CDD:278689 52/116 (45%)
Hel89BNP_001287351.1 HEAT repeat 5..30 CDD:293787
HEAT repeat 42..70 CDD:293787
HEAT repeat 395..420 CDD:293787
HEAT repeat 433..465 CDD:293787
HEAT repeat 475..504 CDD:293787
HEAT repeat 516..540 CDD:293787
HEAT repeat 560..589 CDD:293787
DUF3535 654..1138 CDD:288874
HEAT repeat 1234..1261 CDD:293787 5/13 (38%)
HEAT repeat 1269..1298 CDD:293787 7/35 (20%)
SNF2_N 1353..1662 CDD:278600 104/317 (33%)
DEXDc 1370..1514 CDD:238005 50/151 (33%)
Helicase_C 1689..1813 CDD:278689 64/222 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467195
Domainoid 1 1.000 47 1.000 Domainoid score I705
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.930

Return to query results.
Submit another query.