DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ino80 and CG10445

DIOPT Version :9

Sequence 1:NP_732413.1 Gene:Ino80 / 42314 FlyBaseID:FBgn0086613 Length:1638 Species:Drosophila melanogaster
Sequence 2:NP_001246974.1 Gene:CG10445 / 40938 FlyBaseID:FBgn0037531 Length:945 Species:Drosophila melanogaster


Alignment Length:1082 Identity:217/1082 - (20%)
Similarity:367/1082 - (33%) Gaps:409/1082 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   393 KQEREAEEQRKQDVELIEVKRQQRKLNFLITQTELYAHFMSKKLGQGSEEDQLRILSQLDEETNA 457
            :|:|:.||...:..||.::|....|||   .:.|....|:          |.||:..        
  Fly    85 QQQRQLEENASETKELCDLKLHLEKLN---ARLEALGEFL----------DTLRLRE-------- 128

  Fly   458 RLAAQDDYDAGEMKLLAQENAEAAMQRDLDK-TRAFDVFAKKKEKEEEEQAQ------ESVEDIK 515
                    |..|:|:  ::|:|.....:..| :..:....:.::|.....||      ..::.:|
  Fly   129 --------DQQEIKI--EDNSELVDHTEQPKWSNLYSGLNRYRQKANHTAAQFYQHKSNIIDSLK 183

  Fly   516 P-----EPRPEMKDL-PQPKMFKGTLKGYQIKGMTWLANIYDQGIS-GILADEMGLGKTVQSIAF 573
            .     :|||.:.|| .||.:....|..:|...:.|:.....|.|| |||||:||||||:..||.
  Fly   184 TLYEPIQPRPAIDDLEKQPALLLVRLLKHQQSCLKWMQFRERQKISGGILADDMGLGKTLSMIAL 248

  Fly   574 L------------------------------------------------------------CHI- 577
            :                                                            ||: 
  Fly   249 ILASEETKNRKREEKKKALTLKWTQEFNRVYCKEIRKISMFDDEEESGKEEEQYEPPEKRTCHVK 313

  Fly   578 ---------------------------------------------AEHYGVWGPF-----LVISP 592
                                                         .||... |.:     ||:.|
  Fly   314 TKKINQFRILDDDDNDAGDKAVVEDEQKDLLAKTPEPEVFSSDEEEEHLSN-GRYPSANTLVVCP 377

  Fly   593 ASTLHNWQQEMSRFVPD--FKVVPYWGSPAERKI-LRQFWDQKHLHTRDASFHVVITSYQLVVSD 654
            .|.:..|..|::..|..  .:|:.:.| |...:| :..|          .|:.:|||||.|||::
  Fly   378 MSVMCQWAHEVASKVAQNAIRVLTFHG-PNRHEIGIEAF----------RSYDLVITSYNLVVNE 431

  Fly   655 YKYFNR------IKWQYMVLDEAQAIKSAASQRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLH 713
            .|.:..      :.|..::||||..|:::.:.....:..........|:|||:||...:::|||.
  Fly   432 LKRYGNTSPLFAVYWNRVILDEAHIIRNSKTNCCNSVCQLRAHCHWALTGTPVQNRGVDVFALLR 496

  Fly   714 FI-MPTLFDSHDEFNEWFSKDIESHAENKTGIDEKQIS--RLHMILKPFMLRRIKK------DVE 769
            |: :|...|    ..:|           |..::|..:.  ||:.|:||.||||.|:      |:.
  Fly   497 FVNVPNFQD----LQQW-----------KKNLNESMLGHRRLNFIIKPLMLRRTKQKLQASGDMP 546

  Fly   770 NELSDKIEIMVYCPLTIRQKLLYR---ALKQKIRIEDLLHLTSGSTTTSSSSSASNLMNLVMQFR 831
            ...|.||| ::...|:..:..:|:   |:.:||..:.||....|::                   
  Fly   547 ALPSLKIE-LICVQLSKTEMAVYQILSAISKKIFTQFLLQREKGNS------------------- 591

  Fly   832 KVCNHPELFERRDARSPFFMRCAEYTIPRLIHEEGLIHRMLPSRKHLLYNRFNIFKSEYIQRSLF 896
                                                                             
  Fly   592 ----------------------------------------------------------------- 591

  Fly   897 EDVNVNSCFGFTRLCDLSVGDMVEVTLNGLIDFLLHYRRVLEKYPLLAYRRFWWKKQPDSRY-QL 960
             |:|..|                                 ||:.|     :|......|.|| ::
  Fly   592 -DLNYYS---------------------------------LERTP-----QFIAGHMSDERYNEI 617

  Fly   961 LEPMLENKLALDYMPPNSVLKNFIFTAMTANESSVYAFGDYFTYNMQETIEHRVIRSKILKKKTS 1025
            .|..|:   :|.|.|...:|..:|...:               ..:::...|..:...:|:...:
  Fly   618 YERFLK---SLGYNPGEKILGIYILVLL---------------LRLRQFCCHPGLMIGMLRGALT 664

  Fly  1026 LIEEMEDVSKQKLEIESVEVQTKSNAKSDVKVTTLLLLPEFPHRPRKPRKYVCEPLSMPRILYDL 1090
                .|||...|::...||.|        :|:..|..|.:|.....:..  .|:.....|  .|.
  Fly   665 ----AEDVQNVKVDASDVEGQ--------LKMDVLAELDKFDETDSEDD--CCDEEDSTR--RDG 713

  Fly  1091 GQKVQAVHRYLYCDSRSAAWSQIRHNQCENSQGRELVSS-----------GLALCKPHGGWSSIV 1144
            ..|::.:.            .:|:........|.:|.::           .|.|..|.......:
  Fly   714 NFKLEVIK------------DEIKEENVPWDSGDDLPTASSFEDQLDSARALKLLNPQNPIFQFI 766

  Fly  1145 VPDKETLITDAGKL-FVLDNLLTRLKANGHRVLIYSQMTKMIDL----LEEYMWHRKHRYMRLDG 1204
            .|        :.|| .|:|.|...|.....::::.||....:.:    |::..|.      .||.
  Fly   767 RP--------SAKLKMVIDKLEELLTGTNDKIIVTSQWVSYLAIVRKRLQDLSWE------TLDF 817

  Fly  1205 SSKISAR-RDMV-ADFQTRADIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHR 1267
            :.:::|: |::| .||....:..|.|||..|||:|:||..|:.::..|..|||.:::||.||.:|
  Fly   818 NGQLTAKEREIVLRDFNANNEKRVLLLSLTAGGVGLNLNVANHMLIVDLHWNPQLERQAQDRIYR 882

  Fly  1268 LGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVI--SGG 1307
            .||||...:||.:|:.|:|:||......|.||.::|:  .||
  Fly   883 YGQTKPTFIYRYMCQDTVEQRIKSLQDCKLEIAKVVLPEEGG 924

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ino80NP_732413.1 DBINO 313..438 CDD:290603 12/44 (27%)
SNF2_N 538..840 CDD:278600 89/434 (21%)
DEXDc 555..700 CDD:238005 49/265 (18%)
Helicase_C 1156..1269 CDD:278689 37/119 (31%)
CG10445NP_001246974.1 HepA <90..945 CDD:223627 215/1077 (20%)
DEAD-like_helicase_N 209..534 CDD:421690 74/351 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467130
Domainoid 1 1.000 47 1.000 Domainoid score I705
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.930

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