DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ino80 and CG7376

DIOPT Version :10

Sequence 1:NP_732413.1 Gene:Ino80 / 42314 FlyBaseID:FBgn0289122 Length:1638 Species:Drosophila melanogaster
Sequence 2:NP_648034.1 Gene:CG7376 / 38715 FlyBaseID:FBgn0035689 Length:1270 Species:Drosophila melanogaster


Alignment Length:1328 Identity:236/1328 - (17%)
Similarity:412/1328 - (31%) Gaps:569/1328 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   401 QRKQDVELIEVKRQQ----RKLNFLITQTELYAHFMSKKLGQGSEEDQLRILSQLDEETNARLAA 461
            :.|::: ||.:::.|    |||.|...:.|           .||   .:.:||.  |:|:.| |.
  Fly    39 EHKEEI-LICIEKCQNARTRKLKFRSIRQE-----------SGS---CILVLSH--EQTHVR-AR 85

  Fly   462 QDDYDAGEMKL--------------LAQENAEAAMQRDLD---KTRAFD-VFAKKKEKEEEEQAQ 508
            :.:.:.||..|              :||:..|  .:|.|.   .|:.:| ::.|.::....||. 
  Fly    86 EIEMEVGEQVLPLFFKDFRGSLEFEVAQQEKE--HKRPLKTYVTTKLYDALYEKHRQTVHVEQE- 147

  Fly   509 ESVEDIKPEPRPEMKDLPQPKMFKGTLKGYQIKGMTWLANIYDQ---------------GIS--- 555
                          :.|..||.|:..|:.||.:.::|:.....|               ||:   
  Fly   148 --------------RSLDLPKRFQSQLRKYQQRTVSWMLGREQQITQVPANFIVLHAIDGITRVF 198

  Fly   556 -----------------------GILADEMGLGKTVQSIAFL----------------------- 574
                                   |||||||||||||:.:|.|                       
  Fly   199 KHKYCLQFYPFEEEIPKISLPPGGILADEMGLGKTVEFLAMLLMNPRPQDSYRNDYWHQRLEEFS 263

  Fly   575 -----------------CHIAEHYG-------------------------------VW------- 584
                             |...:.:|                               .|       
  Fly   264 DEVPLKRSRISKKDEVFCICTKKHGKRVQCTKCRRWQHEMCMTISEKSDLPHLCPSCWSELVKSG 328

  Fly   585 ------GPFLVISPASTLHNWQQEMSRFV-PDFKVVPYWGSPAERKILRQFWDQKHLHTRD-ASF 641
                  |..:::||.:....|.:|:.:.: |..||:.|:|      :...||    :...| |.:
  Fly   329 ERLVESGATIIVSPNAIKMQWFEEIHKHISPSLKVLLYFG------LHSTFW----VSPFDLAQY 383

  Fly   642 HVVITSYQLV------VSDYK----------YFN------RIKWQYMVLDEAQAIKSAASQRWKL 684
            .||:|.|.::      .:|:|          |..      .:.|..:.|||||.::|:.|...::
  Fly   384 DVVLTDYTILRNEIYHTTDFKSDRQMRHQQRYMRPNSPLLMVNWWRVCLDEAQMVESSTSAAAEM 448

  Fly   685 LLGFSCRNRLLLSGTPIQNSMAELWALLHFI-MPTLFDSHDEFNEWFSKDIESHAENKTGIDEKQ 748
            :......||..::||     :.||..||.|: .|.:....|   .|.:.|.......|       
  Fly   449 VRMLPAINRWAVTGT-----IDELPPLLEFVGRPEVCRPPD---AWQTVDKAFQLNYK------- 498

  Fly   749 ISRLHMILKPFMLRRIKKDVENELS--DKIEIMVYCPLTIRQKLLYRALKQKIRIEDLL----HL 807
            ...|..:|:..:.|..|..||:||.  .:.|::....|:..:.|.||....|...:.|.    |.
  Fly   499 CEPLLELLEHSLWRTCKSKVEHELGIPPQTEVVHRLELSNVESLYYREEHLKCHEQFLAAVAKHT 563

  Fly   808 TSGSTTTSSSSSAS-NLMNLV----MQFRKVCNHPELFERRDARSPFFMRCAEYTIPRLIHEEGL 867
            ...:..:|..:|.| .|:.::    ::.|:.|:.|.:|....:.:.:            :|.:.|
  Fly   564 RHNADNSSCLASISPQLLRIILKPFLRIRQTCSVPVVFNSNVSSTDY------------LHPQDL 616

  Fly   868 IHRMLPSRKH------------------------------LLYNRFNIFKSEYIQRSLFED--VN 900
            :.|:..:.::                              ..||......:||.::::..|  :.
  Fly   617 LARLKSNNENECKTELRTWASSYNGLAAIYFIKNDFPQAIKYYNLLLKLANEYNEQNISVDSVLQ 681

  Fly   901 VNSCFGFTRLCDLSVGD---------------------MVEVTLNGLIDFLLHYRRVLEKYPLLA 944
            :::.:...:...|:..:                     .:|.....|...|..|...|||...|.
  Fly   682 IHAIYNLLQASSLAPAEHKLTELEHKKYQAQMSRLEWKYLEDNTRVLESALSSYNENLEKVSELE 746

  Fly   945 YRRFWWKKQPDSRYQLLEPMLENKLALDYMPPNSVLKNFIFTAMTANESSVYAFGDYFTYNMQ-E 1008
                  |:...|...||..|:.:|.:|.....|.|.                  .|:|..|:. |
  Fly   747 ------KRFEGSTLDLLATMVNHKTSLHDAIWNKVR------------------DDFFRQNISVE 787

  Fly  1009 TIEH-----------RVIRSKILKKKTSLIEEME---DVSKQKLE------IESVEVQTKSNAKS 1053
            .:|:           .:..:|:...|::||.|.|   .|.:|..|      :.|:|:   .|...
  Fly   788 RLENVNSMAGMLYFMDIWHNKLQNLKSTLIAEFEFLKGVMQQACEAIKTGVLLSMEI---INFIE 849

  Fly  1054 DVKVTTLL-LLPEFPHRPRKPRKY-----------------------------VCEPLSMPRILY 1088
            :|.|..|. :|.....:|.||:|:                             |.|.|..|.:..
  Fly   850 NVTVCHLTDILDANKDKPVKPKKHRYCRLCLIRDSLNQFECLLFAKKLDEKATVTEGLENPSMEI 914

  Fly  1089 DLGQKVQAVHRYLYCDSRSAAWSQIRHNQCENSQGRELVS-----------------------SG 1130
            ..   ::::..:|......:.|.:    :|::.  .||:|                       ..
  Fly   915 SF---IKSIFAFLRSKQDFSEWKE----ECQSK--LELLSCLQDLVKFQIKYWIEVEYMVKAFDE 970

  Fly  1131 LALCKPHGGWSSIVVPDKETLITDAGKLFVLDNLLTRLKANGHRVLI-----------YSQMTKM 1184
            |.:||            ...|:||..:           :.:.:|:|.           |:..|..
  Fly   971 LEMCK------------MRILLTDDPE-----------EQSNYRILACQLDEQLQFNQYNLQTSQ 1012

  Fly  1185 IDLLE-----EYMWHRKH----------------RYM-----------------RLDGSSKIS-- 1209
            ::...     :|:.|.|.                ||:                 |.:|.:.::  
  Fly  1013 LNFTRLCGRLKYLKHLKEDSADKPCPICQTQDDVRYVMMVCGHFVCQHCLDSMRRKNGRAGVTKC 1077

  Fly  1210 -----------------ARRDMVADFQTRAD-----------------IFVF------------- 1227
                             |.:.::.||.|:..                 |.||             
  Fly  1078 PLCRQDSPQLYYSVRPGAHKSIIGDFSTKISSVVELVLKIKGENEQEKIIVFSQWQAILIEIARA 1142

  Fly  1228 ------------------------------LLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAM 1262
                                          |:....|..|:||..|..|...:...||..::||:
  Fly  1143 LSLNGIQFRNKCTNKDFDDFKNPLSNVTCLLMPLSKGSKGLNLIEATHVFLVEPILNPGDERQAI 1207

  Fly  1263 DRAHRLGQTKQVTVYRLICKGTIEERIL 1290
            .|.||.||.:...|:|.|...||||.||
  Fly  1208 GRIHRFGQKRPTKVHRFIVNETIEENIL 1235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ino80NP_732413.1 HepA 364..>855 CDD:440319 126/636 (20%)
DEXQc_INO80 535..763 CDD:350760 70/377 (19%)
SF2_C_SNF 1146..1280 CDD:350180 39/261 (15%)
PHA03247 <1535..1637 CDD:223021
CG7376NP_648034.1 DEXQc_SHPRH 160..513 CDD:350828 70/377 (19%)
PHD_SF 281..320 CDD:473978 2/38 (5%)
TPR 636..669 CDD:197478 2/32 (6%)
RING_Ubox 1036..1082 CDD:473075 4/45 (9%)
SF2_C_SNF 1104..1225 CDD:350180 22/120 (18%)
Blue background indicates that the domain is not in the aligned region.

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