DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ino80 and Iswi

DIOPT Version :10

Sequence 1:NP_732413.1 Gene:Ino80 / 42314 FlyBaseID:FBgn0289122 Length:1638 Species:Drosophila melanogaster
Sequence 2:NP_523719.1 Gene:Iswi / 36390 FlyBaseID:FBgn0011604 Length:1027 Species:Drosophila melanogaster


Alignment Length:967 Identity:248/967 - (25%)
Similarity:375/967 - (38%) Gaps:387/967 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   395 EREAEEQRKQDVELIEVKRQQRKLNFLITQTELYAHFMSKKLGQGSEEDQLRILSQLDEETNARL 459
            |:|||...|     ||..| .|:.:||:.|||::.|||                      ||:  
  Fly    30 EKEAEFDNK-----IEADR-SRRFDFLLKQTEIFTHFM----------------------TNS-- 64

  Fly   460 AAQDDYDAGEMKLLAQENAEAAMQRDLDKTRAFDVFAKKKEKEEEEQAQESVEDIKPEPRPEMKD 524
            |.......|..|.:          :|.||.:  ||...:..|.|:|:.:|.:.:..........|
  Fly    65 AKSPTKPKGRPKKI----------KDKDKEK--DVADHRHRKTEQEEDEELLAEDSATKEIFRFD 117

  Fly   525 LPQPKMFKGTLKGYQIKGMTWLANIYDQGISGILADEMGLGKTVQSIAFLCHIAEHYGVWGPFLV 589
            .....:..|.::.|||:|:.|:.::|:.||:||||||||||||:|:|:.|.::.......||.:|
  Fly   118 ASPAYIKSGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIV 182

  Fly   590 ISPASTLHNWQQEMSRFVPDFKVVPYWGSPAERKILRQFWDQKHLHTRD----ASFHVVITSYQL 650
            |.|.|||.||..|..::.|..:.|...|..          |.::...||    ..:.|.:|||::
  Fly   183 IVPKSTLQNWVNEFKKWCPSLRAVCLIGDQ----------DTRNTFIRDVLMPGEWDVCVTSYEM 237

  Fly   651 VVSDYKYFNRIKWQYMVLDEAQAIKSAASQRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFI 715
            .:.:...|.:..|:|:|:|||..||:..|:..::|..|...||||::|||:||::.||||||:|:
  Fly   238 CIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITGTPLQNNLHELWALLNFL 302

  Fly   716 MPTLFDSHDEFNEWFSKDIESHAENKTGIDEKQISRLHMILKPFMLRRIKKDVENELSDKIEIMV 780
            :|.:|:|.::|:|||:       .|....|:..|:|||.:||||:|||:|.:||..|..|.|:.:
  Fly   303 LPDVFNSSEDFDEWFN-------TNTCLGDDALITRLHAVLKPFLLRRLKAEVEKRLKPKKEMKI 360

  Fly   781 YCPLTIRQKLLYRALKQKIRIEDLLHLTSGSTTTSSSSSASNLMNLVMQFRKVCNHPELFERRDA 845
            :..|:..|:..|    .|:.::| :.:.:|    :.......|.|::||.||..|||.||:..:.
  Fly   361 FVGLSKMQRDWY----TKVLLKD-IDVVNG----AGKVEKMRLQNILMQLRKCTNHPYLFDGAEP 416

  Fly   846 RSPFFMRCAEYTIPRLIHEEGLIHRMLPSRKHLLYNRFNIFKSEYIQRSLFEDVNVNSCFGFTRL 910
            ..|       ||                :..||:||                             
  Fly   417 GPP-------YT----------------TDTHLVYN----------------------------- 429

  Fly   911 CDLSVGDMVEVTLNGLIDFLLHYRRVLEKYPLLAYRRFWWKKQPDSRYQLLEPMLENKLALDYMP 975
                                                                             
  Fly   430 ----------------------------------------------------------------- 429

  Fly   976 PNSVLKNFIFTAMTANESSVYAFGDYFTYNMQETIEHRVIRSKILKKKTSLIEEMEDVSKQKLEI 1040
                                                                             
  Fly   430 ----------------------------------------------------------------- 429

  Fly  1041 ESVEVQTKSNAKSDVKVTTLLLLPEFPHRPRKPRKYVCEPLSMPRILYDLGQKVQAVHRYLYCDS 1105
                                                                             
  Fly   430 ----------------------------------------------------------------- 429

  Fly  1106 RSAAWSQIRHNQCENSQGRELVSSGLALCKPHGGWSSIVVPDKETLITDAGKLFVLDNLLTRLKA 1170
                                                             :||:.:||.||.:|:.
  Fly   430 -------------------------------------------------SGKMAILDKLLPKLQE 445

  Fly  1171 NGHRVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGSSKISARRDMVADF-QTRADIFVFLLSTRAG 1234
            .|.||||:||||:|:|:||:|...|.:.|.||||.:....|...:.:| ...:..|:|:||||||
  Fly   446 QGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAG 510

  Fly  1235 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAREKSEI 1299
            ||||||..||.||.|||||||.:|.||||||||:||.|||.|:|||.:.|:||:|::||..|..:
  Fly   511 GLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRL 575

  Fly  1300 QRMVISGGNF---KPDTLKPKEVVSLL--------------LDDEEIE-MKYRQEAK 1338
            .:|||.||..   :.:.|...|:::::              :.||:|: :..|.|||
  Fly   576 DKMVIQGGRLVDNRSNQLNKDEMLNIIRFGANQVFSSKETDITDEDIDVILERGEAK 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ino80NP_732413.1 HepA 364..>855 CDD:440319 149/463 (32%)
DEXQc_INO80 535..763 CDD:350760 90/231 (39%)
SF2_C_SNF 1146..1280 CDD:350180 70/134 (52%)
PHA03247 <1535..1637 CDD:223021
IswiNP_523719.1 PLN03142 46..967 CDD:215601 239/945 (25%)
Blue background indicates that the domain is not in the aligned region.

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