DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ino80 and Iswi

DIOPT Version :9

Sequence 1:NP_732413.1 Gene:Ino80 / 42314 FlyBaseID:FBgn0086613 Length:1638 Species:Drosophila melanogaster
Sequence 2:NP_523719.1 Gene:Iswi / 36390 FlyBaseID:FBgn0011604 Length:1027 Species:Drosophila melanogaster


Alignment Length:967 Identity:248/967 - (25%)
Similarity:375/967 - (38%) Gaps:387/967 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   395 EREAEEQRKQDVELIEVKRQQRKLNFLITQTELYAHFMSKKLGQGSEEDQLRILSQLDEETNARL 459
            |:|||...|     ||..| .|:.:||:.|||::.|||                      ||:  
  Fly    30 EKEAEFDNK-----IEADR-SRRFDFLLKQTEIFTHFM----------------------TNS-- 64

  Fly   460 AAQDDYDAGEMKLLAQENAEAAMQRDLDKTRAFDVFAKKKEKEEEEQAQESVEDIKPEPRPEMKD 524
            |.......|..|.:          :|.||.:  ||...:..|.|:|:.:|.:.:..........|
  Fly    65 AKSPTKPKGRPKKI----------KDKDKEK--DVADHRHRKTEQEEDEELLAEDSATKEIFRFD 117

  Fly   525 LPQPKMFKGTLKGYQIKGMTWLANIYDQGISGILADEMGLGKTVQSIAFLCHIAEHYGVWGPFLV 589
            .....:..|.::.|||:|:.|:.::|:.||:||||||||||||:|:|:.|.::.......||.:|
  Fly   118 ASPAYIKSGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIV 182

  Fly   590 ISPASTLHNWQQEMSRFVPDFKVVPYWGSPAERKILRQFWDQKHLHTRD----ASFHVVITSYQL 650
            |.|.|||.||..|..::.|..:.|...|..          |.::...||    ..:.|.:|||::
  Fly   183 IVPKSTLQNWVNEFKKWCPSLRAVCLIGDQ----------DTRNTFIRDVLMPGEWDVCVTSYEM 237

  Fly   651 VVSDYKYFNRIKWQYMVLDEAQAIKSAASQRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFI 715
            .:.:...|.:..|:|:|:|||..||:..|:..::|..|...||||::|||:||::.||||||:|:
  Fly   238 CIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITGTPLQNNLHELWALLNFL 302

  Fly   716 MPTLFDSHDEFNEWFSKDIESHAENKTGIDEKQISRLHMILKPFMLRRIKKDVENELSDKIEIMV 780
            :|.:|:|.::|:|||:       .|....|:..|:|||.:||||:|||:|.:||..|..|.|:.:
  Fly   303 LPDVFNSSEDFDEWFN-------TNTCLGDDALITRLHAVLKPFLLRRLKAEVEKRLKPKKEMKI 360

  Fly   781 YCPLTIRQKLLYRALKQKIRIEDLLHLTSGSTTTSSSSSASNLMNLVMQFRKVCNHPELFERRDA 845
            :..|:..|:..|    .|:.::| :.:.:|    :.......|.|::||.||..|||.||:..:.
  Fly   361 FVGLSKMQRDWY----TKVLLKD-IDVVNG----AGKVEKMRLQNILMQLRKCTNHPYLFDGAEP 416

  Fly   846 RSPFFMRCAEYTIPRLIHEEGLIHRMLPSRKHLLYNRFNIFKSEYIQRSLFEDVNVNSCFGFTRL 910
            ..|       ||                :..||:||                             
  Fly   417 GPP-------YT----------------TDTHLVYN----------------------------- 429

  Fly   911 CDLSVGDMVEVTLNGLIDFLLHYRRVLEKYPLLAYRRFWWKKQPDSRYQLLEPMLENKLALDYMP 975
                                                                             
  Fly   430 ----------------------------------------------------------------- 429

  Fly   976 PNSVLKNFIFTAMTANESSVYAFGDYFTYNMQETIEHRVIRSKILKKKTSLIEEMEDVSKQKLEI 1040
                                                                             
  Fly   430 ----------------------------------------------------------------- 429

  Fly  1041 ESVEVQTKSNAKSDVKVTTLLLLPEFPHRPRKPRKYVCEPLSMPRILYDLGQKVQAVHRYLYCDS 1105
                                                                             
  Fly   430 ----------------------------------------------------------------- 429

  Fly  1106 RSAAWSQIRHNQCENSQGRELVSSGLALCKPHGGWSSIVVPDKETLITDAGKLFVLDNLLTRLKA 1170
                                                             :||:.:||.||.:|:.
  Fly   430 -------------------------------------------------SGKMAILDKLLPKLQE 445

  Fly  1171 NGHRVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGSSKISARRDMVADF-QTRADIFVFLLSTRAG 1234
            .|.||||:||||:|:|:||:|...|.:.|.||||.:....|...:.:| ...:..|:|:||||||
  Fly   446 QGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAG 510

  Fly  1235 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAREKSEI 1299
            ||||||..||.||.|||||||.:|.||||||||:||.|||.|:|||.:.|:||:|::||..|..:
  Fly   511 GLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRL 575

  Fly  1300 QRMVISGGNF---KPDTLKPKEVVSLL--------------LDDEEIE-MKYRQEAK 1338
            .:|||.||..   :.:.|...|:::::              :.||:|: :..|.|||
  Fly   576 DKMVIQGGRLVDNRSNQLNKDEMLNIIRFGANQVFSSKETDITDEDIDVILERGEAK 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ino80NP_732413.1 DBINO 313..438 CDD:290603 17/42 (40%)
SNF2_N 538..840 CDD:278600 113/305 (37%)
DEXDc 555..700 CDD:238005 53/148 (36%)
Helicase_C 1156..1269 CDD:278689 63/113 (56%)
IswiNP_523719.1 DBINO <30..67 CDD:290603 20/66 (30%)
SNF2_N 131..411 CDD:278600 113/305 (37%)
DEXDc 148..287 CDD:238005 53/148 (36%)
HELICc 422..553 CDD:238034 72/403 (18%)
HAND 697..796 CDD:286232
SANT 797..838 CDD:197842
SANT 799..838 CDD:238096
SLIDE 853..965 CDD:286233
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467157
Domainoid 1 1.000 47 1.000 Domainoid score I705
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.930

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