DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ino80 and Srcap

DIOPT Version :9

Sequence 1:NP_732413.1 Gene:Ino80 / 42314 FlyBaseID:FBgn0086613 Length:1638 Species:Drosophila melanogaster
Sequence 2:XP_017445721.1 Gene:Srcap / 361652 RGDID:1565642 Length:3266 Species:Rattus norvegicus


Alignment Length:2588 Identity:524/2588 - (20%)
Similarity:788/2588 - (30%) Gaps:1186/2588 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 EERQSVKAQLYNFNDLTSDREWLYDLLLSDTESDDPTITEDEYVQQLLREHVREQRQRKNYYKKA 157
            ||.|.:.|      |...:|.|...:             ..:.|:.::|.| .||||::...::.
  Rat   142 EEMQWLSA------DFAQERRWKRGV-------------ARKVVRMVIRHH-EEQRQKEERARRE 186

  Fly   158 ANAQYAYYGSGLL-------SNHDIFAERQLATAGVRKRRR-----------RTKQ------EIL 198
            ..|:.....|.:.       ||.:...:.:..:....||::           :|::      :.|
  Rat   187 EQAKLRRIASTMAKDVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFIVGQTEKYSDLLSQSL 251

  Fly   199 MARLAEAQAGPKPPKQRRRGRKKRDNMGSPESGEVPPSELGKYTFGDTLPNNEDDDEDGGEVDYK 263
            ...||.::||..|            .:||..:...||.           |.:..|||||   |::
  Rat   252 NQPLASSKAGSSP------------CLGSSSAASSPPP-----------PVSRLDDEDG---DFQ 290

  Fly   264 RELASLALDYPEEEEIEEEVDVEGGTEGQVTKVRRK-----------------RKNPAALAARRR 311
            .:       ..|||:.||.::||...||...:.:|:                 |..|..|.....
  Rat   291 PQ-------EEEEEDDEETIEVEEQQEGNDAETQRREIELLRHEGELPLEELLRSLPPQLLGGPF 348

  Fly   312 RIWQIMSKKE---SGRLQRIKSNNHKEM--------LANCKRVAGMCAKVVRQRAINSQRIMKET 365
            ...|..|...   .|..:.|:....:::        :..|.:   .|                  
  Rat   349 SPSQTPSHDSDTPDGPEENIEEEPSQDLEVDPPSSSVTQCNK---QC------------------ 392

  Fly   366 VWRAKRLTREMLAYWKRYERVERDQRRKQER--EAEEQRKQDV----ELIEVKRQ-QRKLNFLIT 423
             |.......|..|        ..|:...:|.  .||||.:.:|    ||.|:.|: :..:..|:.
  Rat   393 -WHPDEDDEEFTA--------NEDEAEDEEDTIAAEEQLEGEVDHAMELSELAREGELSMEELLQ 448

  Fly   424 Q-TELYAHFMSKKLGQGSEEDQLRILS-----QLDEETNARLAAQDDYDAGEMKLLAQENAEAAM 482
            | ...||:..|.. |.|:.||:..:.:     :|:|..:...|||:  |:......|:|::|...
  Rat   449 QYAGAYAYDASAP-GSGNSEDEEEVEANSSDCELEETRDVEEAAQE--DSSSQSDSAEEHSEDEE 510

  Fly   483 QRDLDKTRAFDVFAKKKEKEEEEQAQ-ESVEDIKPE----------------------------- 517
            ....::..:....:::.|.:|.|.|| :|..|.:.|                             
  Rat   511 DEHSEEEMSGSSQSEESESDESEDAQSQSQADEEQEDEGDDDDDDFGVEYLLARDDERSEVDGGS 575

  Fly   518 ------------PRPEMKDL---------------------PQPKMFKGTLKGYQIKGMTWLANI 549
                        |:.|:.|:                     |.|.:.:|.|:.||..|:.||..:
  Rat   576 GPPTPGPTTTLGPKKEITDIAAAAESLQPKGYTLATTQVKTPIPLLLRGQLREYQHIGLDWLVTM 640

  Fly   550 YDQGISGILADEMGLGKTVQSIAFLCHIAEHYGVWGPFLVISPASTLHNWQQEMSRFVPDFKVVP 614
            |::.::||||||||||||:|:|:.|.|:|...|.|||.|:|.|.|.:.||:.|:.|:.|.||::.
  Rat   641 YEKKLNGILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILT 705

  Fly   615 YWGSPAERKILRQFWDQKHLHTRDASFHVVITSYQLVVSDYKYFNRIKWQYMVLDEAQAIKSAAS 679
            |:|:..|||:.||.|      |:..:|||.||||:||:.|::.|.|..|:|::|||||.||:..|
  Rat   706 YYGAQKERKLKRQGW------TKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKS 764

  Fly   680 QRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPTLFDSHDEFNEWFSKDIESHAENKTGI 744
            |||:.||.|:.:.||||:|||:|||:.|||:|:||:||.:|.||.||.||||..:....|.....
  Rat   765 QRWQSLLNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEY 829

  Fly   745 DEKQISRLHMILKPFMLRRIKKDVENELSDKIEIMVYCPLTIRQKLLYRALKQKIRIEDLLHLTS 809
            :|..:.|||.:|:||:|||:|.|||.::..|.|.::.|.|:.||:.||         :|.:    
  Rat   830 NEGLVKRLHKVLRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLY---------DDFM---- 881

  Fly   810 GSTTTSSSSSASNLM---NLVMQFRKVCNHPELFERRDARSPFF------------MRCAE-YTI 858
            ..|||..:.:..:.|   |::||.|||||||.||:.|...|||.            :|..| :.:
  Rat   882 AQTTTKETLATGHFMSVINILMQLRKVCNHPNLFDPRPVTSPFITPGICFSTASLVLRATEVHPL 946

  Fly   859 PR-------LIHEEGLIHR-----MLP----SRKHLL------------------YNRF--NIFK 887
            .:       ||..||.:.|     .||    ||:.||                  .||.  .:.|
  Rat   947 QQIDMGRFDLIGLEGRVSRYEADTFLPRHRLSRRILLEIATAPDPPPRPKPVKMKVNRMLQPVPK 1011

  Fly   888 SE--------------------------------------------------------------- 889
            .|                                                               
  Rat  1012 QEGRTVVVVNSPRAPLGPVPVRPPPGPEVSTQPTLGPVPPVLPTPLMVSASPAGTPVVPASRPPG 1076

  Fly   890 -----YIQ------------------------------------------------RSLFEDVNV 901
                 .:|                                                .||.:.:.|
  Rat  1077 PVLLSPLQPNTGPLPQVLPSPMGVMSGTSRPPTPTLSLKPAPPAPVRLSPAPPPGSSSLLKPLTV 1141

  Fly   902 NSCFGFT---------------------------------------RLCD---LSVGDMV----- 919
            ..  |:|                                       ||..   :|:|.:.     
  Rat  1142 PP--GYTLSPVAATTTSSTIATVTTTAVPAPNSTPQRLILSPEMQARLPSGEVVSIGQLASLAQR 1204

  Fly   920 ------------------EVTLNG-----------------------------LIDFLLHYR--- 934
                              ::||.|                             ||....|..   
  Rat  1205 PVTSAGGSKPLTFQIQGNKLTLTGAQVRQLAVGQPRPLQRNVVHLVSAGGQHHLISQPAHVALIQ 1269

  Fly   935 ----------------------------------------------------------------- 934
                                                                             
  Rat  1270 AVAPTPGPTPVSVLPSTPSTTPAPTGLSLPLAANQVPPSMVNNTGVVKIVVRQAPRDGLTPVPPL 1334

  Fly   935 ------------RVLEKYPLLAYRR-----FWWKKQPDSRYQLLEPMLE---------------- 966
                        .||...|.|...|     ....:.|.....|:.|:|:                
  Rat  1335 APAPRPSSSGLPAVLTPRPTLTPSRLTSPTLGTTRTPIPTPTLVRPLLKLVHSPSPEVSASAPGA 1399

  Fly   967 ----------------------------------------------------------------- 966
                                                                             
  Rat  1400 APMTISSSLHMPSSLPGPASSSMTIHNSSPLSSPVVSSTVSVPVSSSLPISVPTTLPVPASAPLT 1464

  Fly   967 --------------------------------------------NKLAL---------------- 971
                                                        :.|||                
  Rat  1465 IPITAPLPVSDLGPALLTGVTPALAVVSAASGPPLASAGVSPSVSALALGLATTPALSPPQTSGH 1529

  Fly   972 --------DYMP----------------------------------------------------- 975
                    .::|                                                     
  Rat  1530 SLLLATTSSHVPGLNSAVAPACSPVLVPASALTSPFPISPSSAPAQASLLAPAPSTSQALATSLA 1594

  Fly   976 ----------------------------------------------------PNSVL-----KNF 983
                                                                |.|||     :..
  Rat  1595 PMAASQTTILGPSPTPPLAPLPVLAASQTPLPAMTPPSMSGAPLPSSTLVSAPTSVLAPSSTQTL 1659

  Fly   984 IFTAMTANESSVYAFGDYFTYNMQETI-----------EHRV----------IRSKILKKKTSLI 1027
            :.|.:::..||:   ....|..:..|:           .|.:          |::..|...:||:
  Rat  1660 VSTPVSSPLSSL---ASTQTLTLAPTLAPTLGGLSPSQTHSLGTGSPQGPFPIQTLSLTPASSLV 1721

  Fly  1028 EEMEDV--------------------------------------SKQKLEIESVEVQTKSNAKSD 1054
            ......                                      |...|...||:..|.|.|...
  Rat  1722 PTPAQTLSLAPGGPVGPTQTLSLAPSSPVGPAPAHTLTLAPAASSASLLVPTSVQTLTLSPAPVP 1786

  Fly  1055 V------KVTTLLLLPEFPHRPR------------------------------------------ 1071
            |      ...||.|.|.....|.                                          
  Rat  1787 VPTLDPSATQTLALAPALTQAPASQASSLVSASGAASLPVTMVNRLPVPKDEPETLTLRSGPPSP 1851

  Fly  1072 ----------KPRKYVCEPLSMPRILYDLGQK--------------VQAVHRYL----------Y 1102
                      :||:....|...|..|..|.:|              :...|..|          :
  Rat  1852 LPTATSFSGPRPRRQPPPPPRSPFYLDSLEEKRKQQRSERLERIFQLSEAHGALAPVYGTEVLDF 1916

  Fly  1103 C----------------DSRSAAWS------------QIRHNQCENSQGR--------ELVSSGL 1131
            |                .|....|:            |.|.:|......|        |.....|
  Rat  1917 CTLPQPVASPIGPRSPGPSHPIFWTYTEAAHQAVLFPQQRLDQLSEIIERFIFVMPPVEAPPPSL 1981

  Fly  1132 ALC------KPHGG----------W------SSIV------VPDKETLITDAGKLFVLDNLLTRL 1168
            ..|      .||..          |      ..||      .||...:..|.|||..|..||.:|
  Rat  1982 HACHPPPWLAPHQAAFQEQLACELWPRARPLHRIVCNMRTQFPDLRLIQYDCGKLQTLAVLLRQL 2046

  Fly  1169 KANGHRVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGSSKISARRDMVADFQTRADIFVFLLSTRA 1233
            ||.||||||::|||:|:|:||:::.:..|.|:|||||:::..|:.::..|.....||.|:||||:
  Rat  2047 KAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRS 2111

  Fly  1234 GGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAREKSE 1298
            ||:|:|||.||||:|||||||||:|.||.||.||:|||:.|.:||||.:.|:||.||::|.:|..
  Rat  2112 GGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRM 2176

  Fly  1299 IQRMVISGGN-----FKPDTLK----------PKEVVSLLLDDEEIEMKYRQE-------AKLQS 1341
            :..|.|.|||     ||..|::          |...||.:.::||..:..:|.       .:.:.
  Rat  2177 LGDMAIEGGNFTTAYFKQQTIRELFDMPLEEPPGSSVSSVPEEEEETVASKQTHILEQALCRAED 2241

  Fly  1342 SSPIPAATQ--SERKRRHPQKDVNMGGTTIAATSATQ-NPDDDVPSCSSAAKRIKLETEE----- 1398
            ...|.||||  :|:.....:.:.|.|........|:: .|..:....|.|.:.|....|:     
  Rat  2242 EEDIRAATQAKAEQVAELAEFNENEGFPAGEGEEASRPGPGAEDEEMSRAEQEIAALVEQLTPIE 2306

  Fly  1399 ----DFIDVGITSSASSVGTDSNHPTLSQETYVPGATCVQQTEIDSENEALV----VDGDSPTML 1455
                .|::       :|:...|.......|..|..|    :.::|...|.:.    .:.:.|   
  Rat  2307 RYAMKFLE-------ASLEEVSREELKQAEEQVEAA----RKDLDQAKEEVFRLPQEEEEGP--- 2357

  Fly  1456 GQNESMNFLDDLSGISPMRRRHHPRGTRRG-----RPRGSTRRGGGHGSIP-------------- 1501
            |..:.|:..  .||:|..|.:......|.|     |.||:.....|....|              
  Rat  2358 GAGDEMSCA--TSGVSHRRSKKVKAPERLGTRVSERLRGARAETQGANHTPVTSSHQTCNTFVPP 2420

  Fly  1502 -------RVLTPTQAATPAVPATASQAAAAGTGAAAGTSSP-------LPQQEVSGGGDNAGVPL 1552
                   |:..|..|..||.||....|:.|...|.|..:.|       ||             |:
  Rat  2421 RCSPVRERIPRPRPAPPPAPPAPPPAASPAPAPAPAPPAPPPPVLPPVLP-------------PV 2472

  Fly  1553 HEEEYRTSPSGQSPGVSCKRGPGRPRSKTAT-PISRGTRGAPRARRPM----------------- 1599
            .......||...||...    |..|.:..|: |.|..|.....|..|:                 
  Rat  2473 PPPPPAPSPPAPSPAPP----PPAPAASVASAPASAITSSLATAPIPISAPNPVTILPVHILPSP 2533

  Fly  1600 GPLL-VPLGRSPDDTPPSSS---------PA-----TSRAPSPLSGSHGAVGP 1637
            .||| :|...||..||||:.         ||     ||.:|:||......:.|
  Rat  2534 APLLQLPPCSSPASTPPSACTPLPTCTPLPAQTSLLTSSSPAPLDSLPVPISP 2586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ino80NP_732413.1 DBINO 313..438 CDD:290603 25/143 (17%)
SNF2_N 538..840 CDD:278600 140/304 (46%)
DEXDc 555..700 CDD:238005 74/144 (51%)
Helicase_C 1156..1269 CDD:278689 64/112 (57%)
SrcapXP_017445721.1 HSA 127..196 CDD:400077 15/73 (21%)
DEXQc_SRCAP 626..848 CDD:350761 112/227 (49%)
PHA03247 <995..1502 CDD:223021 29/508 (6%)
PHA03247 <1272..1857 CDD:223021 40/587 (7%)
SF2_C_SNF 2023..2158 CDD:350180 73/134 (54%)
mukB <2244..>2337 CDD:235316 20/103 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D188211at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.