DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ino80 and Etl1

DIOPT Version :9

Sequence 1:NP_732413.1 Gene:Ino80 / 42314 FlyBaseID:FBgn0086613 Length:1638 Species:Drosophila melanogaster
Sequence 2:NP_609320.2 Gene:Etl1 / 34311 FlyBaseID:FBgn0032157 Length:844 Species:Drosophila melanogaster


Alignment Length:1294 Identity:299/1294 - (23%)
Similarity:489/1294 - (37%) Gaps:493/1294 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 SDDSSTVGVVRMKQSSKRKSRLLA--SKEERQSVKAQLYNFNDLTSDREWLYDLLLSDTESDDPT 129
            |...|::..:|..:.:|..|.::|  |:.||...|.::....|..||          ..:|..|.
  Fly    16 SSAKSSLSDLRQFRINKNASSVVASPSRTERVPGKKRIQVMADSDSD----------GNDSQTPK 70

  Fly   130 ITEDEYVQQLLREHVREQRQRKNYYKKAANAQYAYYGSGLLSNHDIFAERQLATAGVRKRRRRTK 194
            .|:.|..       |:|:.:|             |..:..:|.|       ..|..:::...||.
  Fly    71 KTKLELT-------VKEKEER-------------YMAAAKISPH-------FDTMAIQESLSRTN 108

  Fly   195 QEILMARLAEAQAGPKPPKQRRRGRKKRDNMGSPESGEVPPSELGKYTFGDTLPNNEDDDEDGGE 259
            .::..:           .:..|...|.:.:.|.....::.|...|  ..|....:|:..|:|   
  Fly   109 WDVAAS-----------VRYLRENCKPKGHNGPLAKSKLKPRSNG--ISGGNFSDNDHSDDD--- 157

  Fly   260 VDYKRELASLALDYPEEEEIEEEVDVEGGTEGQVTKVRRKRKNPAALAARRRRIWQIMSKKESGR 324
             |.|:          .::::.:..|.:.....::|             .:|::::|.|::.....
  Fly   158 -DVKQ----------SKDQVYDSDDSDSEMSTKMT-------------GQRKKVFQFMNEASLIE 198

  Fly   325 LQRIKSNNHKEMLANCKRVAGMCAKVVRQRAINSQRIMKETVWRAKRLTREMLAYWKRYERVERD 389
            ||.:|:.:.|:.||           ::..|..:....:::.: .:.|::.::|.|          
  Fly   199 LQSVKTLSEKKALA-----------IIDVRPFSDWSDLRQKL-ESIRMSGDLLNY---------- 241

  Fly   390 QRRKQEREAEEQRKQDVELIEVKRQQRKLNFLITQTELYAHFMSKKLGQGSEEDQLRILSQLDEE 454
                    |:|                    ||.:....|..:||         ...::|:|:: 
  Fly   242 --------AQE--------------------LINKQNTVAAILSK---------CNNMVSRLEK- 268

  Fly   455 TNARLAAQDDYDAGEMKLLAQENAEAAMQRDLDKTRAFDVFAKKKEKEEEEQAQESVEDIKPEPR 519
                               |..|....::                                    
  Fly   269 -------------------AISNGAGIVE------------------------------------ 278

  Fly   520 PEMKDLPQPKMFKGTLK--GYQIKGMTWLANIYDQGISGILADEMGLGKTVQSIAFLCHIAEHYG 582
                   |||:....|:  .|||.|:.||..::.|.::||||||||||||:|.||||.::.|:..
  Fly   279 -------QPKLLSSGLQLADYQIIGLNWLTVMHKQEMNGILADEMGLGKTIQVIAFLAYLKENGL 336

  Fly   583 VWGPFLVISPASTLHNWQQEMSRFVPDFKVVPYWGSPAERKILR-QFWDQKHLHTRD--ASFHVV 644
            .....|::.|:|||.||:.|:||:.|:..|..|.||..||:.:| :|       .:|  ..|.|:
  Fly   337 SQAAHLIVVPSSTLDNWEAEISRWCPELVVEKYHGSQDERRRMRGRF-------AKDGFTGFDVL 394

  Fly   645 ITSYQLVVS---DYKYFNRIKWQYMVLDEAQAIKSAASQRWKLLLGFSCRNRLLLSGTPIQNSMA 706
            :|:|.:|.|   :.|.|...|..|::.|||..:|:..:||:..|:..:.|.|:||:|||:||::.
  Fly   395 LTTYHIVGSTPEERKMFRVCKLDYVIFDEAHMLKNMTTQRYANLITINARMRILLTGTPLQNNLL 459

  Fly   707 ELWALLHFIMPTLF-DSHDEFNEWFSKDIESHAENK--TGIDEKQISRLHMILKPFMLRRIKKDV 768
            ||.:||.|:||..| .|.::....|:|..:|..:..  :...|.||.|...|:|||:|||:||||
  Fly   460 ELISLLCFVMPKFFAKSIEDIKSLFAKKGKSDGDQDEVSQFQETQIQRAKRIMKPFVLRRLKKDV 524

  Fly   769 ENELSDKIEIMVYCPLTIRQKLLYRALKQKIRIEDLLHLTSGSTTTSSSSSASNLMNLVMQFRKV 833
            ...|..|:.::...|::.:||:.|..|      .|......|...:||..:...:|   |:.|::
  Fly   525 LKNLPKKLSLVEKVPMSSQQKIYYHEL------VDYYSNNKGEVCSSSERAGIAIM---MEMRRI 580

  Fly   834 CNHPELFERRDARSPFFMRCAEYTIPRLIHEEGLIHRMLPSRKHLLYNRFNIFKSEYIQRSLFED 898
            .|||                                                    .:.|..|.|
  Fly   581 ANHP----------------------------------------------------LLMRHYFTD 593

  Fly   899 VNVNSCFGFTRLCDLSVGDMVEVTLNGLIDFLLHYRRVLEKYPLLAYRRFWWKKQPDSRYQLLEP 963
            .|:..                                                            
  Fly   594 ANLRG------------------------------------------------------------ 598

  Fly   964 MLENKLALDYMPPNSVLKNFIFTAMTANESSVYAFGDYFTYNMQETIEHRVIRSKILKKKTSLIE 1028
                                 |:...||.||.                          |||:   
  Fly   599 ---------------------FSKRLANASSF--------------------------KKTN--- 613

  Fly  1029 EMEDVSKQKLEIESVEVQTKSNAKSDVKVTTLLLLPEFPHRPRKPRKYVCEPLSMPRILYDLGQK 1093
                                                         .:|:.|.|:   ::.|. |.
  Fly   614 ---------------------------------------------EQYIFEELA---VMSDF-QV 629

  Fly  1094 VQAVHRYLYCDSRSAAWSQIRHNQCENSQGRELVSSGLALCKPHGGWSSIVVPDKETLITDAGKL 1158
            .|.::::.:.|                                      :.:||  .||.|:||.
  Fly   630 YQMMNKHEFYD--------------------------------------VKIPD--NLICDSGKF 654

  Fly  1159 FVLDNLLTRLKANGHRVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGSSKISARRDMVADFQTRAD 1223
            ..||.||.:|||.|||||::||.|.|:|::|||:..||..:.||||::.::.|:|::.||.....
  Fly   655 LYLDTLLPKLKAEGHRVLLFSQFTMMLDIVEEYLRIRKFGFCRLDGATAVNVRQDLITDFNGDDS 719

  Fly  1224 IFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEER 1288
            ||||||||:|||:|||||||||.:.:|.|:||..|:||.||.||:||.:.||:||||.:.||||.
  Fly   720 IFVFLLSTKAGGVGINLTAADTCVIHDIDFNPYNDKQAEDRCHRMGQQRPVTIYRLISESTIEEG 784

  Fly  1289 ILQRAREKSEIQRMVISGGNFKPDTLKPKEVVSLL-----LDDEEIEMKYRQEAKLQSS 1342
            ||..|.||.::::.:.|  |.|.:..:.:.||.||     ||.:       ||.:|.:|
  Fly   785 ILMAAEEKLKLEKDITS--NEKGEVHEQRCVVKLLTTALGLDKD-------QEEQLNNS 834

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ino80NP_732413.1 DBINO 313..438 CDD:290603 19/124 (15%)
SNF2_N 538..840 CDD:278600 115/310 (37%)
DEXDc 555..700 CDD:238005 60/150 (40%)
Helicase_C 1156..1269 CDD:278689 63/112 (56%)
Etl1NP_609320.2 SNF2_N 292..587 CDD:278600 115/362 (32%)
DEXDc 308..453 CDD:238005 60/151 (40%)
Helicase_C 651..765 CDD:278689 63/113 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467144
Domainoid 1 1.000 47 1.000 Domainoid score I705
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.930

Return to query results.
Submit another query.