DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ino80 and ino80

DIOPT Version :10

Sequence 1:NP_732413.1 Gene:Ino80 / 42314 FlyBaseID:FBgn0289122 Length:1638 Species:Drosophila melanogaster
Sequence 2:XP_004917366.1 Gene:ino80 / 100127778 XenbaseID:XB-GENE-957629 Length:1547 Species:Xenopus tropicalis


Alignment Length:1729 Identity:743/1729 - (42%)
Similarity:958/1729 - (55%) Gaps:313/1729 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 MAEPLHIQRLEAALNMRPFMNMAKRSLRKPLSSDEETD--DEHVVKREHD-----VQDSDDSSTV 73
            :|:||::|.||.||.:..|:........:.:||||..|  ||..:..|.:     |::...|..:
 Frog    16 LAKPLYLQYLERALRLDQFLRQTSAVFNRSISSDESEDGLDETPLLPEAEDPSLQVKEEPMSPLL 80

  Fly    74 GVVRMKQSSKRKSRLLA-------SKEERQSVKAQLYNFNDLTSDREWLYDLLLSDTESDDPTIT 131
            |    :.|....:.||:       .|.|.:|.:...|||:.|...|:||.::|||:..||..:::
 Frog    81 G----EPSGDGSTDLLSVHALNGILKPEPKSERGSFYNFSKLKKSRKWLKNILLSEDSSDTDSLS 141

  Fly   132 ED---------EYVQQLLREHVREQRQRKNYYKKAANAQYAYYGSGLLSNHDIFAERQLATAGVR 187
            |:         |.:..:||.|..::..:..|.|.....||.||.:||||.||.|.|:|....|.|
 Frog   142 EEDEEEFSLSKEELHDMLRIHKYKKLHQSKYLKDKELHQYQYYSAGLLSTHDPFYEQQRHFLGPR 206

  Fly   188 KRRRRTKQEILMARLAEAQAGPKPPKQRRRGRKKRDNMGSPESGEVPPSELGKYTFGDTLPNNED 252
            |::.:.::: ..|:|      .|..|:|||              |...||       |.||... 
 Frog   207 KKKIKEEKK-FKAKL------KKVKKKRRR--------------EEDLSE-------DELPRRH- 242

  Fly   253 DDEDGGEVDYKRELASLALDYPEEEEIEEEVDVEGGTEGQVTKV-RRKRKNPAALAARRRRIWQI 316
                    .:.:..|..:.|.|                   |.| ::|......|.||||::||:
 Frog   243 --------HHTKVFAKFSHDAP-------------------TPVGKKKHLTLEQLNARRRKVWQM 280

  Fly   317 MSKKESGRLQRIKSNNHKEMLANCKRVAGMCAKVVRQRAINSQRIMKETVWRAKRLTREMLAYWK 381
            :.|||..:..:.|.:....:|.|.|::|..|.:.||:.||.:|:..|||:.||:|||:||..|||
 Frog   281 IVKKELPKAYKQKVSARNLLLTNSKKLAHQCMREVRRAAIQAQKNCKETLPRARRLTKEMSLYWK 345

  Fly   382 RYERVERDQRRKQEREAEEQRKQDVELIEVKRQQRKLNFLITQTELYAHFMSKKLGQGSEEDQLR 446
            :|::||::.|::.|:||.||||.|.|:.|.||||||||||||||||||||:|:|...|.:..|..
 Frog   346 KYDKVEKEHRKRAEKEALEQRKLDEEMREAKRQQRKLNFLITQTELYAHFVSRKRESGPDGIQEE 410

  Fly   447 ILSQLDEETNARLA---------AQDDYDAGEMKLLAQENAEAAMQRDLDKTRAFDVFAKKKEKE 502
            ||.:|::.::....         :|.|||:...|..|.:|||.|.:....:||:||..||:....
 Frog   411 ILRKLEDSSSQEQVGAGGSYLHLSQMDYDSDYYKSQALKNAEEAFRIHQAQTRSFDEDAKESRAA 475

  Fly   503 EEEQA-------QESVEDIKPEPRPEMKDLPQPKMFKGTLKGYQIKGMTWLANIYDQGISGILAD 560
            .:..|       .||.....|..|.. :|:|||.:|.|.|||||:|||.||||:|:|||:|||||
 Frog   476 AQRVAIKLESGFGESYSLANPSIRAG-EDIPQPTIFNGKLKGYQLKGMNWLANLYEQGINGILAD 539

  Fly   561 EMGLGKTVQSIAFLCHIAEHYGVWGPFLVISPASTLHNWQQEMSRFVPDFKVVPYWGSPAERKIL 625
            ||||||||||||.|.|:||...:|||||:|||||||:||.||.|||||.|||:||||||.|||::
 Frog   540 EMGLGKTVQSIALLAHLAERENIWGPFLIISPASTLNNWHQEFSRFVPKFKVLPYWGSPHERKVI 604

  Fly   626 RQFWDQKHLHTRDASFHVVITSYQLVVSDYKYFNRIKWQYMVLDEAQAIKSAASQRWKLLLGFSC 690
            |:||.||.|:|::|.||||||||||||.|.|||.|:||||||||||||:||::|.|||:||.|.|
 Frog   605 RKFWGQKTLYTQEAPFHVVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQC 669

  Fly   691 RNRLLLSGTPIQNSMAELWALLHFIMPTLFDSHDEFNEWFSKDIESHAENKTGIDEKQISRLHMI 755
            ||||||:||||||:||||||||||||||||||||||:||||||||||||||:.|||.|:||||||
 Frog   670 RNRLLLTGTPIQNTMAELWALLHFIMPTLFDSHDEFSEWFSKDIESHAENKSAIDENQLSRLHMI 734

  Fly   756 LKPFMLRRIKKDVENELSDKIEIMVYCPLTIRQKLLYRALKQKIRIEDLLHLTSGSTTTSSSSSA 820
            |||||||||||||||||||||||::||.||.||||||:|||.||.|:|||..:.| |...:.::.
 Frog   735 LKPFMLRRIKKDVENELSDKIEILMYCSLTTRQKLLYQALKNKISIDDLLQSSMG-TAQQAQNTT 798

  Fly   821 SNLMNLVMQFRKVCNHPELFERRDARSPFFMRCAEYTIPRLIHEEGLIHRMLPSRKHLLYNRFNI 885
            |:||||||||||||||.|||||::..|||......|.|.:.:...|.|:.:..||...|....:.
 Frog   799 SSLMNLVMQFRKVCNHSELFERQETWSPFHFSLRPYQISKFLFRHGNINCLNWSRNRWLRVMLSP 863

  Fly   886 FKSEYIQRSLF--EDVNVNSCFGFTRLCDLSVGDMVEVTLNGLIDFLLHYRRVLEKYPLL--AYR 946
            |..::||:|||  ...:..|||.|.|..|:...::..:.|.|      |..|.|..:..|  |||
 Frog   864 FAPDHIQQSLFHRNGSDKESCFSFLRFIDVCPAEIGNLMLRG------HLARWLALFLSLKAAYR 922

  Fly   947 ----RFWWK-KQPDSRYQLLEPMLENK-------LALDYMPPN----SVLKNFIFTAMTANESSV 995
                |.|.: .|.||    |...|.|:       .||.:  ||    |.|:..:|   |::...:
 Frog   923 LHNARVWDEGSQSDS----LNSYLTNRSLILWVNFALSF--PNLHSSSTLQELVF---TSHCRPI 978

  Fly   996 YAFGDYFTYNMQETIEHRVIRSKILKKKTSLIEEMEDVSKQKLEIESVEVQTKSNAKSDVKVTTL 1060
            ...|||..:.                                          :.:.:|.|....:
 Frog   979 SGRGDYVLHG------------------------------------------RKSGQSQVLHCQI 1001

  Fly  1061 LLLPEFPHRPRKPRKYVCEPLSMPRILYDLGQKVQAVHRYLYCDSRSAAWS--QIRH------NQ 1117
            ...|.|        .||..||            |.|....:||:.|||.:.  :.|.      .|
 Frog  1002 TQFPSF--------LYVASPL------------VTASPIDIYCNDRSAEYERREFREGGGPVSRQ 1046

  Fly  1118 CENSQGRELVS--------------SGLALCKPHGGWSSIVVPDKETLITDAGKLFVLDNLLTRL 1168
            |......||.:              .||...||..|||.|.:||||:||||:|||:.||.|||||
 Frog  1047 CLMFGAPELYADWPKRQLQFFPASPGGLMTIKPCNGWSYIKIPDKESLITDSGKLYALDLLLTRL 1111

  Fly  1169 KANGHRVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGSSKISARRDMVADFQTRADIFVFLLSTRA 1233
            |::|||||||||||:|||||||||.:|||.|||||||||||.|||||||||:|.|||||||||||
 Frog  1112 KSHGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQSRTDIFVFLLSTRA 1176

  Fly  1234 GGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAREKSE 1298
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||:||||
 Frog  1177 GGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSE 1241

  Fly  1299 IQRMVISGGNFKPDTLKPKEVVSLLLDDEEIE--MKYRQEAKLQSSSPIPAATQSERKRRHPQKD 1361
            |||:||||||||||||||||||||||||||:|  ::.|||.|.|.........:..::.::.:| 
 Frog  1242 IQRVVISGGNFKPDTLKPKEVVSLLLDDEELEKKLRQRQEEKRQQEETNKVKERKRKREKYAEK- 1305

  Fly  1362 VNMGGTTIAATSATQNPDDDV----------------PSCSSAAKRIKLETEEDFIDVGITSSAS 1410
                          :..:|:|                ||..::  .:..:.|:.||.|.     |
 Frog  1306 --------------KKKEDEVDGRRKKDGGNLVIPFLPSADNS--NLSADGEDSFISVD-----S 1349

  Fly  1411 SVGTDSNHPTLSQETYVPGATCVQQTEIDSENEALVVDGDSPTMLGQNESMN--------FLDDL 1467
            ::.:..:..::|.|.:. |:....    :|.|:.||:..|..:...|:...|        ..::|
 Frog  1350 AMPSPFSEISISSELHT-GSIAPD----ESSNDMLVIVDDPSSSAQQSRGTNSPASITGSVSENL 1409

  Fly  1468 SGISPMRRRHHPRGTR------RGRPRGSTRRGGGHGSIPRVLTPTQAATPAVPATASQAAAAGT 1526
            :|||   .:..|...|      |||.:.......|..|..|..|...||..|.....:.||:|..
 Frog  1410 NGIS---NQETPNSARVNSSRNRGRAKAGANSSKGGKSRSRKSTAGSAAAIAGAMAGAAAASAAA 1471

  Fly  1527 GAAAG--TSSPLPQQEVSGGGDNAGVPLHEEEYRTSPSGQSPGVSCKRGPGRPRSKTATPISRGT 1589
            .||.|  .|..||          |..||.....|||      |:| ..||....|...:|:|:||
 Frog  1472 YAAYGYNVSKGLP----------ASSPLQTSLLRTS------GIS-DFGPINTSSPINSPLSKGT 1519

  Fly  1590 RGAPRARRPMGPLLVPLGRSPDDTPPSSSPATSRAPSPL 1628
               |:...|:|  |.|      :||......||..|..|
 Frog  1520 ---PKINNPIG--LAP------ETPTRRHGKTSSTPGGL 1547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ino80NP_732413.1 HepA 364..>855 CDD:440319 322/506 (64%)
DEXQc_INO80 535..763 CDD:350760 181/227 (80%)
SF2_C_SNF 1146..1280 CDD:350180 119/133 (89%)
PHA03247 <1535..1637 CDD:223021 28/94 (30%)
ino80XP_004917366.1 HepA 330..>826 CDD:440319 317/497 (64%)
DEXQc_INO80 514..742 CDD:350760 181/227 (80%)
SF2_C_SNF 1088..1223 CDD:350180 119/134 (89%)

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