DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dl and Dll1

DIOPT Version :9

Sequence 1:NP_001247193.1 Gene:Dl / 42313 FlyBaseID:FBgn0000463 Length:833 Species:Drosophila melanogaster
Sequence 2:NP_114452.2 Gene:Dll1 / 84010 RGDID:70949 Length:714 Species:Rattus norvegicus


Alignment Length:690 Identity:283/690 - (41%)
Similarity:366/690 - (53%) Gaps:101/690 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLTAFICFTVIVQVHSSGSFELRLKYFSNDHGRDNEGRCCSGESDGATGKCLGSCKTRFRVCLKH 71
            :::|.:|     ||.|||.|||:|:.|.|..|......||.|   |:...|  :|:|.|||||||
  Rat    11 VVSALLC-----QVWSSGVFELKLQEFVNKKGLLGNRNCCRG---GSGPPC--ACRTFFRVCLKH 65

  Fly    72 YQATIDTTSQCTYGDVITPILGENSVNLTDAQRFQNKGFTNPIQFPFSFSWPGTFSLIVEAWHDT 136
            |||::.....||||..:||:||.:|.:|.|.... :..|:|||:|||.|:||||||||:||.|..
  Rat    66 YQASVSPEPPCTYGSAVTPVLGVDSFSLPDGAGI-DPAFSNPIRFPFGFTWPGTFSLIIEALHTD 129

  Fly   137 NNSGNARTN-KLLIQRLLVQQVLEVSSEWKTNKSESQYTSLEYDFRVTCDLNYYGSGCAKFCRPR 200
            :....|..| :.||.||..|:.|.|..||..:...|..|.|.|.:|..||.:|||.||:.|||||
  Rat   130 SPDDLATENPERLISRLTTQRHLTVGEEWSQDLHSSGRTDLRYSYRFVCDEHYYGEGCSVFCRPR 194

  Fly   201 DDSFGHSTCSETGEIICLTGWQGDYCHIPKCAKGC--EHGHCDKPNQCVCQLGWKGALCNECVLE 263
            ||:|||.||.|.||.:|..||:|.||..|.|..||  :||:||||.:|.|::||:|..|:||:..
  Rat   195 DDAFGHFTCGERGEKMCDPGWKGQYCTDPICLPGCDDQHGYCDKPGECKCRVGWQGRYCDECIRY 259

  Fly   264 PNCIHGTCNKPWTCICNEGWGGLYCNQDLNYCTNHRPCKNGGTCFNTGEGLYTCKCAPGYSGDDC 328
            |.|:||||.:||.|.|.||||||:|||||||||:|:||:||.||.|||:|.|||.|.|||:|.:|
  Rat   260 PGCLHGTCQQPWQCNCQEGWGGLFCNQDLNYCTHHKPCRNGATCTNTGQGSYTCSCRPGYTGANC 324

  Fly   329 ENEIYSCDADVNPCQNGGTCIDEPHTKTGYKCHCANGWSGKMCEEKVLTCSDKPCHQGICRNVRP 393
            |.|:..|..  :||:|||:|.|   .:..|.|.|..|:.||:||...:||:|.||..|       
  Rat   325 ELEVDECAP--SPCRNGGSCTD---LEDSYSCTCPPGFYGKVCELSAMTCADGPCFNG------- 377

  Fly   394 GLGSKGQGYQCECPIGYSGPNCDLQLDNCSPNPCINGGSCQPSGKCICPAGFSGTRCETNIDDCL 458
                                      ..||.||  :||.     .|.|||||||..||..||.|.
  Rat   378 --------------------------GRCSDNP--DGGY-----TCHCPAGFSGFNCEKKIDLCS 409

  Fly   459 GHQCENGGTCIDMVNQYRCQCVPGFHGTHCSSKVDLCLIRPCANGGTCLNLNNDYQCTCRAGFTG 523
            ...|.||..|:|:.|.|.|:|..||.|.:|...||.|...||||||||.:..||:.|||..|:||
  Rat   410 SSPCSNGAKCVDLGNSYLCRCQTGFSGRYCEDNVDDCASSPCANGGTCRDSVNDFSCTCPPGYTG 474

  Fly   524 KDCSVDIDECSSGPCHNGGTCMNRVNSFECVCANGFRGKQCD----EESYDSVTFDAHQYGATTQ 584
            ::||..:..|...|||||.||..|...:.|.||.|:.|..|.    |...|              
  Rat   475 RNCSAPVSRCEHAPCHNGATCHQRGQRYMCECAQGYGGANCQFLLPEPPPD-------------- 525

  Fly   585 ARADGLTNAQVVLIAVFSVAMPLVAVIA------------ACVVFCMKRKRKRAQEKDDAEARKQ 637
                       :::|....:.|.|||.|            |.||.|::.|.::.|...|....:.
  Rat   526 -----------LIVAAQGGSFPWVAVCAGVVLVLLLLLGCAAVVVCVRLKLQKHQPPPDPCGGET 579

  Fly   638 NEQNAVATMHHNGSGVGVALASASLGGKTGSNSGLTFDGG 677
            ...|.:|..... ..|.|::..|:....|...:....|.|
  Rat   580 ETMNNLANCQRE-KDVSVSIIGATQIKNTNKKADFHGDHG 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DlNP_001247193.1 MNNL 23..96 CDD:284966 34/72 (47%)
DSL 164..226 CDD:279722 32/61 (52%)
EGF_CA 291..329 CDD:238011 25/37 (68%)
EGF_CA 337..372 CDD:238011 13/34 (38%)
EGF_CA 453..488 CDD:238011 15/34 (44%)
EGF_CA 492..526 CDD:238011 19/33 (58%)
EGF_CA 529..564 CDD:238011 14/34 (41%)
Dll1NP_114452.2 MNNL 22..91 CDD:400141 34/73 (47%)
DSL 158..220 CDD:128366 32/61 (52%)
EGF_CA 287..325 CDD:238011 25/37 (68%)
EGF_CA 328..363 CDD:238011 14/39 (36%)
EGF_CA <372..402 CDD:238011 17/69 (25%)
EGF_CA 405..440 CDD:238011 15/34 (44%)
EGF_CA 442..477 CDD:238011 19/34 (56%)
EGF 484..514 CDD:394967 14/29 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 644..690
Interaction with MAGI1. /evidence=ECO:0000250|UniProtKB:Q61483 711..714
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338539
Domainoid 1 1.000 106 1.000 Domainoid score I6469
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4104
Inparanoid 1 1.050 554 1.000 Inparanoid score I1077
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D197806at33208
OrthoFinder 1 1.000 - - FOG0002026
OrthoInspector 1 1.000 - - otm45603
orthoMCL 1 0.900 - - OOG6_104568
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1332
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.800

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