DRSC/TRiP Functional Genomics Resources

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Protein Alignment Delta and Cubn2

DIOPT Version :10

Sequence 1:NP_477264.1 Gene:Delta / 42313 FlyBaseID:FBgn0000463 Length:833 Species:Drosophila melanogaster
Sequence 2:NP_729748.3 Gene:Cubn2 / 39334 FlyBaseID:FBgn0259140 Length:3613 Species:Drosophila melanogaster


Alignment Length:511 Identity:147/511 - (28%)
Similarity:194/511 - (37%) Gaps:137/511 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   258 NECVLEPNCIHGTCN---KPWTCICNEGWGGLYCNQDLNYC-----TNHRPCKNGGTCFNTGEGL 314
            |||:..|....|||:   |.:.|.|..||.|..|..|:|.|     |:...|.|.|.|.|| .|.
  Fly   156 NECLSNPCKNGGTCHDAYKGFQCECPAGWQGDSCEDDVNECFTLAGTDLDGCLNNGQCINT-PGS 219

  Fly   315 YTCKCAPGYSGDDCENEIYSC--DADVNPCQNGGTCIDEPHTKTGYKCHCANGW----------S 367
            |.|.|..|::|..|.....:|  ......|...||||...:: .||.|.|..||          |
  Fly   220 YRCVCRNGFTGTHCRLRHNTCLFGGSRELCGEHGTCIQAANS-AGYVCICDQGWTWADANVTSAS 283

  Fly   368 GKMCEEKVLTCSDK--PCHQGICRNVRPGLGSKGQGYQC-ECPIGYSGPN--CDLQLDNCSPNPC 427
            ...|...|..|..:  |||.. |.|: ||      .::| .||.||:|..  | ..:|.|:... 
  Fly   284 PSACVRDVDECEPRVNPCHDE-CINL-PG------SFRCGACPTGYTGDGRFC-RDIDECASED- 338

  Fly   428 INGG-SCQPSGKCI----------CPAGFSGTRCETNIDDCLGHQCENGGTC---------IDMV 472
             ||| |.||...|.          ||||::|........|  .:.|.|.|.|         .|||
  Fly   339 -NGGCSLQPRVTCTNTEGSHRCGRCPAGWTGDGRTCTASD--SNSCNNEGICHPLAKCEYVSDMV 400

  Fly   473 NQYRCQCVPGFHGTH------CSSKVDL--CLIRPCANGGTCLNLNNDYQCTCRAGFTGKDCSVD 529
               .|.|..|..| |      ||:....  |...||.|.|||:.......|.|:.|::|..|: .
  Fly   401 ---VCTCPLGSFG-HGYGADGCSADSSRLPCDQHPCQNNGTCVQNGRGTTCICQPGYSGVVCN-S 460

  Fly   530 IDECSSGPCHNGGTCMNRVNS-FECVCANGFRGKQCDEES-YDSVTF-----DAHQYGATTQARA 587
            .|.|...||.|||||....:: ::|||..|:.|..|..:. :..||.     ..| |...|   |
  Fly   461 SDACHPSPCLNGGTCRLLPDAKYQCVCPRGYTGTTCSHQRFFCGVTIRGPSGQLH-YPPNT---A 521

  Fly   588 DG------------LTNAQVVLIAVFSVAMPLVAVIAACVVFCMKRKRKRAQEKDDAEARKQNEQ 640
            ||            .||..:||...|:                      :.|.:|.|:.      
  Fly   522 DGDYQADERCPFIIRTNRNMVLNLTFT----------------------QFQLEDSADC------ 558

  Fly   641 NAVATMHHNGSGVGVALASASLGGKTGSNSGLTFDGGNPNIIKNT-----WDKSVN 691
            .|.....|:|:    :|:|..:|...||...:|    |.::|...     |.:|.|
  Fly   559 TADFLQLHDGN----SLSSRLIGRFCGSRLPMT----NGSVITTQEQVFFWFRSDN 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DeltaNP_477264.1 MNNL 23..182 CDD:462222
DSL 164..226 CDD:128366
EGF_CA 291..329 CDD:238011 16/42 (38%)
EGF_CA 337..372 CDD:238011 12/44 (27%)
EGF_CA 453..488 CDD:238011 13/49 (27%)
EGF_CA 492..526 CDD:238011 11/35 (31%)
EGF_CA 529..564 CDD:238011 14/35 (40%)
Cubn2NP_729748.3 cubilin_NTD 38..141 CDD:412063
EGF_CA 156..190 CDD:238011 13/33 (39%)
EGF_CA 192..233 CDD:238011 16/41 (39%)
EGF_CA 290..328 CDD:214542 15/45 (33%)
EGF_CA 330..374 CDD:214542 14/45 (31%)
EGF 427..455 CDD:394967 10/27 (37%)
EGF_CA 462..496 CDD:238011 14/33 (42%)
CUB 503..619 CDD:238001 30/144 (21%)
CUB 624..738 CDD:238001
CUB 745..854 CDD:238001
CUB 857..963 CDD:238001
CUB 1066..1179 CDD:238001
CUB 1185..1293 CDD:238001
CUB 1303..1406 CDD:238001
CUB 1411..1523 CDD:238001
CUB 1530..1648 CDD:238001
CUB 1754..1862 CDD:238001
CUB 1979..2091 CDD:238001
CUB 2210..2321 CDD:238001
CUB 2327..2441 CDD:238001
CUB 2688..2782 CDD:412131
CUB 2810..2911 CDD:238001
CUB 3029..3143 CDD:238001
CUB 3169..3249 CDD:412131
CUB 3499..3607 CDD:238001
Blue background indicates that the domain is not in the aligned region.

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