DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Delta and dlb

DIOPT Version :10

Sequence 1:NP_477264.1 Gene:Delta / 42313 FlyBaseID:FBgn0000463 Length:833 Species:Drosophila melanogaster
Sequence 2:NP_571033.1 Gene:dlb / 30141 ZFINID:ZDB-GENE-980526-114 Length:615 Species:Danio rerio


Alignment Length:658 Identity:261/658 - (39%)
Similarity:332/658 - (50%) Gaps:106/658 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CLLTAFICFTVIVQVHSSGSFELRLKYFSNDHGRDNEGRCCSGESDGATGKCLGSCKTRFRVCLK 70
            |||:.    :::..|.|||.|||::..||...      |.|....|         |...||:|||
Zfish     8 CLLSV----SLLQLVASSGVFELKVHSFSTTR------RFCRRTRD---------CNIFFRICLK 53

  Fly    71 HYQATIDTTSQCTYGDVITPILGENSVNLTDAQRFQNKGFTNPIQFPFSFSWPGTFSLIVEAW-- 133
            |.:..|.....||:|      .|:.||...|.....:..   .|:.||.|.||||||||:|||  
Zfish    54 HSEDVISAEPPCTFG------TGQTSVLRADQSSIASSA---AIRVPFHFKWPGTFSLIIEAWNA 109

  Fly   134 ------HD-TNNSGNARTNKLLIQRLLVQQVLEVSSEWKTNKSESQYTSLEYDFRVTCDLNYYGS 191
                  || |.|..|      ||.||..::.|.|..:|..:......:.|.|.:.|.||..|:|.
Zfish   110 ESPKEHHDYTENQNN------LISRLATRRRLAVGEDWSQDVHFGDQSELRYSYHVFCDEFYFGE 168

  Fly   192 GCAKFCRPRDDSFGHSTCSETGEIICLTGWQGDYCHIPKCAKGC--EHGHCDKPNQCVCQLGWKG 254
            .|:.:||||||:.||.||.|.|...||.|||||||..|.|:..|  .||:|:.|.:|.|:|||:|
Zfish   169 ACSDYCRPRDDTLGHYTCDENGNKECLVGWQGDYCSDPICSSDCSERHGYCESPGECKCRLGWQG 233

  Fly   255 ALCNECVLEPNCIHGTCNKPWTCICNEGWGGLYCNQDLNYCTNHRPCKNGGTCFNTGEGLYTCKC 319
            ..|:|||..|.|:||||::||.|:|.||||||:|||||||||||:||.||.||.|||:|.|||.|
Zfish   234 PSCSECVHYPGCLHGTCSQPWQCVCKEGWGGLFCNQDLNYCTNHKPCANGATCTNTGQGSYTCTC 298

  Fly   320 APGYSGDDCENEIYSCDADVNPCQNGGTCIDEPHTKTGYKCHCANGWSGKMCEEKVLTCSDKPC- 383
            .||:.|.:||.||..||.  |||:|||:|.|   .:..|.|.|..|:.||.||...:||:|.|| 
Zfish   299 RPGFGGTNCELEINECDC--NPCKNGGSCND---LENDYSCTCPQGFYGKNCEIIAMTCADDPCF 358

  Fly   384 HQGICRNVRPGLGSKGQGYQCECPIGYSGPNCDLQLDNCSPNPCINGGSCQPSGK---CICPAGF 445
            :.|.|.....|      ||.|.||..::|.||:.:||.||..||.|||.|...|.   |.|..||
Zfish   359 NGGTCEEKFTG------GYVCRCPPTFTGSNCEKRLDRCSHKPCANGGECVDLGASALCRCRPGF 417

  Fly   446 SGTRCETNIDDCLGHQCENGGTCIDMVNQYRCQCVPGFHGTHCSSKVDLCLIRPCANGGTCLNLN 510
            ||:|||||||||..:.|:|.|||.|.:                                      
Zfish   418 SGSRCETNIDDCARYPCQNAGTCQDGI-------------------------------------- 444

  Fly   511 NDYQCTCRAGFTGKDCSVDIDECSSGPCHNGGTCMNRVNSFECVCANGFRGKQCDEESYDSVTFD 575
            |||.|||..|||||:||:..|.|.:.||.:||||....:...|.|..||.|..|:.....|:...
Zfish   445 NDYTCTCTLGFTGKNCSLRADACLTNPCLHGGTCFTHFSGPVCQCVPGFMGSTCEFPVQASLEKM 509

  Fly   576 AHQYGATTQARADGLTNAQVVLIAVFSVAMPLVAVIAACVVFCMKRKRKRAQEKDDAEARKQNEQ 640
            |.:.|.|:.        :.|.:..|..|....:.|....||...:|.|.|.|:..|:........
Zfish   510 APRVGQTSP--------SAVAVSCVLGVLAVFLGVCVGLVVLRRRRHRLRRQQLCDSVFNDLETV 566

  Fly   641 NAVATMHH 648
            |.:...|:
Zfish   567 NNLDRQHY 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DeltaNP_477264.1 MNNL 23..182 CDD:462222 54/167 (32%)
DSL 164..226 CDD:128366 28/61 (46%)
EGF_CA 291..329 CDD:238011 25/37 (68%)
EGF_CA 337..372 CDD:238011 14/34 (41%)
EGF_CA 453..488 CDD:238011 11/34 (32%)
EGF_CA 492..526 CDD:238011 11/33 (33%)
EGF_CA 529..564 CDD:238011 13/34 (38%)
dlbNP_571033.1 MNNL 21..159 CDD:462222 54/167 (32%)
DSL 141..203 CDD:128366 28/61 (46%)
EGF_CA 270..308 CDD:238011 25/37 (68%)
EGF_CA 311..346 CDD:238011 17/39 (44%)
EGF_CA <355..385 CDD:238011 12/35 (34%)
EGF_CA 392..423 CDD:238011 15/30 (50%)
EGF_CA 425..460 CDD:238011 22/72 (31%)
EGF 467..497 CDD:394967 12/29 (41%)

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