DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dl and jag1b

DIOPT Version :9

Sequence 1:NP_001247193.1 Gene:Dl / 42313 FlyBaseID:FBgn0000463 Length:833 Species:Drosophila melanogaster
Sequence 2:NP_571938.2 Gene:jag1b / 140423 ZFINID:ZDB-GENE-011128-4 Length:1213 Species:Danio rerio


Alignment Length:985 Identity:311/985 - (31%)
Similarity:417/985 - (42%) Gaps:262/985 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LTAF-ICFTVIVQVHSSGSFELRLKYFSNDHGRDNEGRCCSGESDGATGKCL-GSCKTRFRVCLK 70
            |.|| :|....|. .:||.|||.:....|.:|....|.||.|..:.|..||. ..|.|.|:||||
Zfish    14 LHAFLLCLRTTVS-DASGHFELEILSMQNANGELQNGACCDGARNPADRKCTRDECDTYFKVCLK 77

  Fly    71 HYQATIDTTSQCTYGDVITPILGENSVNLTDAQRFQNKGFTNP---IQFPFSFSWPGTFSLIVEA 132
            .||:.:.:...|::|...||:||.|        :|..||..:.   |..||||:||.:::|||||
Zfish    78 EYQSRVSSAGACSFGTGSTPVLGGN--------KFSTKGTRSEKSRIVLPFSFAWPRSYTLIVEA 134

  Fly   133 WHDTNNSGNARTNKLLIQRLLVQQVLEVSSEWKTNKSESQYTSLEYDFRVTCDLNYYGSGCAKFC 197
            . |.||...:.:.| ||::.....::..:.:|:...........||..||||..:|||.||.|||
Zfish   135 L-DFNNETASESGK-LIEKAYHSGMINPNRQWQRLTHNGPVAQFEYQIRVTCLEHYYGFGCNKFC 197

  Fly   198 RPRDDSFGHSTCSETGEIICLTGWQGDYCHIPKCAKGC--EHGHCDKPNQCVCQLGWKGALCNEC 260
            ||||:.|||.||.:.|...||.||.|..|:...|.:||  |||.|.:|..|.|..||:|..|::|
Zfish   198 RPRDEFFGHYTCDQNGNKTCLEGWTGPDCNTAICRQGCSTEHGSCKQPGGCKCLYGWQGPYCDKC 262

  Fly   261 VLEPNCIHGTCNKPWTCICNEGWGGLYCNQDLNYCTNHRPCKNGGTCFNTGEGLYTCKCAPGYSG 325
            :..|.|:||||.:||.|:|:..|||..|::|||||..|:||.|||||.|||...|.|.|..||||
Zfish   263 IPHPGCVHGTCVEPWQCLCDTNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCEDGYSG 327

  Fly   326 DDCENEIYSCDADVNPCQNGGTCIDEPHTKTGYKCHCANGWSGKMCEEKVLTCSDKPC-HQGICR 389
            .:||...::|.:  |||.|||||   ..|..||:||||.||||..||..|..|:...| |.|.|:
Zfish   328 VNCERAEHACLS--NPCANGGTC---KETSQGYECHCAIGWSGTSCEINVDDCTPNQCKHGGTCQ 387

  Fly   390 NVRPG-----------------------------------LGS---------------------K 398
            ::..|                                   :|:                     |
Zfish   388 DLVNGFKCACPPHWTGKTCQIDANECEDKPCVNAKSCHNLIGAYFCECLPGWSGQNCDININDCK 452

  Fly   399 GQ------------GYQCECPIGYSGPNCDLQLDNCSPNPCINGGSCQP--SG-KCICPAGFSGT 448
            ||            ||:|.||.||:|..|:..:|.|:.:||:|||.||.  :| :|:|||||||.
Zfish   453 GQCLNGGTCKDLVNGYRCLCPPGYTGEQCEKDVDECASSPCLNGGRCQDEVNGFQCLCPAGFSGQ 517

  Fly   449 RCETNIDDCLGHQCENGGTCIDMVN---------------------------------------- 473
            .|:.:||.|..:.|:||..|.::.:                                        
Zfish   518 LCQLDIDYCKPNPCQNGAQCFNLASDYFCKCPDDYEGKNCSHLKDHCRTTSCQVIDSCTVAVASN 582

  Fly   474 --------------------------QYRCQCVPGFHGTHCSSKVDLCLIRPCANGGTCLNLNND 512
                                      |:.|:|..||.||:|...::.|...||.|||||::..|.
Zfish   583 STPEGVRYISSNVCGPHGRCRSQAGGQFTCECQEGFRGTYCHENINDCESNPCRNGGTCIDKVNV 647

  Fly   513 YQCTCRAGFTGKDCSVDIDECSSGPCHNGGTCMNRVNSFECVCANGFRGK-------QCDEESYD 570
            |||.|..|:.|..|.::||:||..||.|.|.|.:.||.|.|.|.||::||       ||||.:.:
Zfish   648 YQCICADGWEGVHCEINIDDCSLNPCLNKGACQDLVNDFYCECRNGWKGKTCHSRDSQCDEATCN 712

  Fly   571 SVTFDAHQYGATTQARADGLTNAQVVLIAVFSVAMPLVAVI-AACVV-------FCMKRKRKRAQ 627
            : ....|..|.|.:.|...........||..|..:|..... ..|||       .|         
Zfish   713 N-GGTCHDEGDTFKCRCSPGWEGATCNIAKNSSCLPNPCENGGTCVVNGDSFNCVC--------- 767

  Fly   628 EKDDAEARKQNEQNAVATMHHNGSGVGVALASASLGGKTGSNSGLTFDGGNPNIIKNTW------ 686
                    |:..:.:..|.:.|........           |||...||.|       |      
Zfish   768 --------KEGWEGSTCTENTNDCNPHPCY-----------NSGTCVDGEN-------WYRCECA 806

  Fly   687 ------DKSVN-NICASAAAAAAAAAAADE-----CLMYGGYVASVADNNNANSDFCVAPLQ--- 736
                  |..:| |.|.| :..|..:...||     ||...|.:.  .|........|:|..|   
Zfish   807 PGFAGPDCRININECQS-SPCAFGSTCVDEINGYRCLCPPGRIG--PDCQEVVGRPCIANGQVTA 868

  Fly   737 -RAKSQKQLN--------TDPTLMHRGSPAGSSAKGASGGGPGAAE----------GKRISVLGE 782
             .||.::..|        ...|:|..|..:..:.| |.||.|.:..          .|....|||
Zfish   869 DGAKWEEDCNICQCQNGRIHCTMMWCGPKSCRTGK-ARGGCPASQSCVPIKEEQCFVKPCPSLGE 932

  Fly   783 GSYCSQRWPS 792
               |   |||
Zfish   933 ---C---WPS 936

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DlNP_001247193.1 MNNL 23..96 CDD:284966 29/73 (40%)
DSL 164..226 CDD:279722 30/61 (49%)
EGF_CA 291..329 CDD:238011 23/37 (62%)
EGF_CA 337..372 CDD:238011 19/34 (56%)
EGF_CA 453..488 CDD:238011 14/100 (14%)
EGF_CA 492..526 CDD:238011 15/33 (45%)
EGF_CA 529..564 CDD:238011 18/41 (44%)
jag1bNP_571938.2 MNNL 29..102 CDD:284966 29/72 (40%)
DSL 164..226 CDD:279722 30/61 (49%)
EGF_CA 293..331 CDD:238011 23/37 (62%)
EGF 337..365 CDD:278437 18/32 (56%)
EGF_CA 371..407 CDD:238011 7/35 (20%)
EGF_CA 409..444 CDD:238011 1/34 (3%)
EGF_CA 447..482 CDD:238011 11/34 (32%)
EGF_CA 484..520 CDD:238011 18/35 (51%)
EGF_CA 522..557 CDD:238011 7/34 (21%)
EGF_CA 626..662 CDD:238011 15/35 (43%)
EGF_CA 664..699 CDD:238011 18/34 (53%)
EGF_CA <711..737 CDD:238011 4/26 (15%)
EGF 745..775 CDD:278437 6/46 (13%)
EGF_CA 779..814 CDD:238011 8/52 (15%)
EGF_CA 817..853 CDD:238011 11/38 (29%)
VWC_out 860..927 CDD:214565 15/67 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1181..1202
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578045
Domainoid 1 1.000 50 1.000 Domainoid score I11640
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D197806at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.850

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