DRSC/TRiP Functional Genomics Resources

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Protein Alignment Delta and jag2b

DIOPT Version :10

Sequence 1:NP_477264.1 Gene:Delta / 42313 FlyBaseID:FBgn0000463 Length:833 Species:Drosophila melanogaster
Sequence 2:NP_571937.1 Gene:jag2b / 140422 ZFINID:ZDB-GENE-011128-3 Length:1254 Species:Danio rerio


Alignment Length:939 Identity:284/939 - (30%)
Similarity:378/939 - (40%) Gaps:280/939 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 HW--IKCLLTAFICFTVIVQVHSSGSFELRLKYFSNDHGRDNEGRCCSGESDGATGKCL-GSCKT 63
            :|  |.|||...  :|.:.|  |||.|||:|....|.:|...:|.||....:....:|: ..|.|
Zfish     9 NWLPIACLLLTM--WTKVSQ--SSGYFELQLIAVENVNGELWDGECCDSTRNSQDQRCVRDECDT 69

  Fly    64 RFRVCLKHYQATIDTTSQCTYGDVITPILGENSVNLTDAQRFQNK-GFTNPIQFPFSFSWPGTFS 127
            .|:||||.||:.:.||.|||:|...|.:||.|..:...|:...:| .....|..||.|:||.:::
Zfish    70 YFKVCLKEYQSEVTTTGQCTFGSGSTDVLGGNIFSFKTAKNSPSKTSDVGKIIIPFHFAWPRSYT 134

  Fly   128 LIVEAWHDTNNSGNARTNKLLIQRLLVQQVLEVSSEWKTNKSESQYTSLEYDFRVTCDLNYYGSG 192
            ||:||| |.:||......:.||:|.:...::.....|::.:.......:||..||.||.|||||.
Zfish   135 LILEAW-DWDNSTQNNGEENLIERHIHASMVNPGDHWQSIRHPGITAHIEYRIRVRCDENYYGSK 198

  Fly   193 CAKFCRPRDDSFGHSTCSETGEIICLTGWQGDYCHIPKCAKGCE--HGHCDKPNQCVCQLGWKGA 255
            |.|.||||||.|||..|..:|.|:||.||.|:.|....|.:||.  ||.|..|.:|.|..||:|.
Zfish   199 CNKQCRPRDDYFGHYRCDPSGNIVCLDGWMGEDCRTAICKQGCNLIHGGCAVPGECKCNYGWQGQ 263

  Fly   256 LCNECVLEPNCIHGTCNKPWTCICNEGWGGLYCNQDLNYCTNHRPCKNGGTCFNTGEGLYTCKCA 320
            .|:||:..|.|:||||..||.|.|.:.||||.|::|||||..|.||.|||||.|:....|.|.|.
Zfish   264 FCDECLPYPGCLHGTCVMPWQCTCEKNWGGLLCDKDLNYCGTHHPCVNGGTCMNSEPDEYNCACP 328

  Fly   321 PGYSGDDCENEIYSCDADVNPCQNGGTCIDEPHTKTGYKCHCANGWSGKMCEEKVLTCSDKPCHQ 385
            .||||.:||...::|.:  |||.|||||.:.|   ||::|||..||.|..|.:.:..|:..||.|
Zfish   329 EGYSGKNCEIAEHACVS--NPCANGGTCHEVP---TGFECHCPPGWEGPTCAKDMDECASSPCAQ 388

  Fly   386 G---------------------------------------ICRNVRPGL---------------- 395
            |                                       .|:|:..|.                
Zfish   389 GGTCIDLENGFECVCPPQWVGKTCQIDANECMGKPCVNAHSCKNMIGGYHCDCFQGWAGQNCDIN 453

  Fly   396 --GSKGQ-------------GYQCECPIGYSGPNCDLQLDNCSPNPCINGGSCQ----------- 434
              |..||             ||.|:||.|:.|.:|::..:.|:..||.|||.|.           
Zfish   454 LNGCHGQCQNGATCKELVHGGYHCQCPAGFVGLHCEVSRNKCASGPCQNGGRCHVILDSFVCECP 518

  Fly   435 ----------------------------------------------------------------- 434
                                                                             
Zfish   519 SNYAGMLCEVESLSHPNPCEPNPCQNTALCYSLPGDFYCACPEDYEGKTCENRKDHCKMTPCQVI 583

  Fly   435 -------------------------PSGKCI----------CPAGFSGTRCETNIDDCLGHQCEN 464
                                     |.|:||          |..||:||.|..|::||:.:.|.|
Zfish   584 DSCTIAVASNSSDGGVRHINSNVCGPHGRCISQPGGNFTCTCELGFTGTYCHENVNDCVSNPCRN 648

  Fly   465 GGTCIDMVNQYRCQCVPGFHGTHCSSKVDLCLIRPCANGGTCLNLNNDYQCTCRAGFTGKDCSVD 529
            ||||||.::.::|.|..|:.|..||..|:.|...||.|||.|::|.||:.|.|..|:.||.|...
Zfish   649 GGTCIDGISSFQCFCPDGWEGDLCSINVNECSRSPCKNGGHCVDLVNDFYCECANGWKGKTCHSR 713

  Fly   530 IDECSSGPCHNGGTCMNRVNSFECVCANGFRGKQCDEESYDSVTFDAHQYGATTQARADGLTNAQ 594
            ..:|.|..|.|||||.:..::|.|.|..|:.|..|:.....:........|.|.....|..|   
Zfish   714 ESQCDSSTCSNGGTCYDHGDAFRCACPPGWEGSTCNTAKNSTCASGPCLNGGTCVGGGDTFT--- 775

  Fly   595 VVLIAVFSVAMPLVAVIAACVVFCMKRKRKRAQEKDDAE----ARKQNEQNAVATMH--HNGSGV 653
                               |:  |          ||..|    |:..|:.|.    |  :||   
Zfish   776 -------------------CI--C----------KDGWEGATCAQNTNDCNP----HPCYNG--- 802

  Fly   654 GVALASASLGGKTGSNSGLTFDGGNPNIIKNTWDKSVNNICASAAAAAAAAAAADEC----LMYG 714
                             |:..||.|       |.:..   ||...|........|||    ..||
Zfish   803 -----------------GICVDGVN-------WFRCE---CAPGFAGPDCRINIDECQSSPCAYG 840

  Fly   715 GYVASVADNNNANSDFCVAPLQRAKSQKQ 743
               |:..|  ..|...||.||.|...|.|
Zfish   841 ---ATCVD--EINGFRCVCPLGRTGPQCQ 864

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DeltaNP_477264.1 MNNL 23..182 CDD:462222 53/160 (33%)
DSL 164..226 CDD:128366 31/61 (51%)
EGF_CA 291..329 CDD:238011 21/37 (57%)
EGF_CA 337..372 CDD:238011 17/34 (50%)
EGF_CA 453..488 CDD:238011 15/34 (44%)
EGF_CA 492..526 CDD:238011 16/33 (48%)
EGF_CA 529..564 CDD:238011 13/34 (38%)
jag2bNP_571937.1 EGF_CA 493..527 CDD:238011 7/33 (21%)
EGF_CA 535..569 CDD:238011 0/33 (0%)
EGF_CA 637..672 CDD:238011 15/34 (44%)
EGF_CA 675..710 CDD:238011 16/34 (47%)
EGF_CA 718..748 CDD:238011 12/29 (41%)
EGF 756..786 CDD:394967 9/63 (14%)
EGF_CA 790..825 CDD:238011 13/68 (19%)
EGF_CA 828..864 CDD:238011 14/40 (35%)
VWC_out 873..944 CDD:214565
MNNL 28..188 CDD:462222 53/160 (33%)
DSL 170..232 CDD:128366 31/61 (51%)
EGF_CA 299..337 CDD:238011 21/37 (57%)
EGF_CA <346..374 CDD:238011 17/30 (57%)
EGF_CA 377..413 CDD:238011 5/35 (14%)
EGF_CA 415..450 CDD:238011 3/34 (9%)
EGF_CA 458..489 CDD:238011 9/30 (30%)
Blue background indicates that the domain is not in the aligned region.

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