DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dl and jag1a

DIOPT Version :9

Sequence 1:NP_001247193.1 Gene:Dl / 42313 FlyBaseID:FBgn0000463 Length:833 Species:Drosophila melanogaster
Sequence 2:XP_005168261.1 Gene:jag1a / 140421 ZFINID:ZDB-GENE-011128-2 Length:1253 Species:Danio rerio


Alignment Length:848 Identity:278/848 - (32%)
Similarity:389/848 - (45%) Gaps:132/848 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IKCLLTAFICFTVIVQVHSSGSFELRLKYFSNDHGRDNEGRCCSGESDGATGKCLG-SCKTRFRV 67
            ::||... :|       .:||.||:::....|.:|....|.||.|..|.|...|.. .|.|.|||
Zfish    18 LRCLWMR-VC-------EASGHFEMQVLSMQNVNGELQNGACCDGARDPAERSCAADQCDTFFRV 74

  Fly    68 CLKHYQATIDTTSQCTYGDVITPILGENSVNLTDAQRFQNKGFTNPIQFPFSFSWPGTFSLIVEA 132
            |||.||:.:.:...|:||...||::|.|:.::....:..:|   ..|..||||:||.:::|||||
Zfish    75 CLKEYQSRVSSGGPCSYGSGSTPVIGGNTFSVKPLDQTNDK---TRIVLPFSFAWPRSYTLIVEA 136

  Fly   133 WHDTNNSGNARTNKLLIQRLLVQQVLEVSSEWKTNKSESQYTSLEYDFRVTCDLNYYGSGCAKFC 197
            ....|:|.....|..:|::.:...::..:.:|:..|........:|..|||||.:|:|.||.|||
Zfish   137 LDFNNDSSTGSINGQVIEKAVQSGMINPNRQWQVLKHNGPVAQFQYQIRVTCDEHYFGFGCNKFC 201

  Fly   198 RPRDDSFGHSTCSETGEIICLTGWQGDYCHIPKCAKGC--EHGHCDKPNQCVCQLGWKGALCNEC 260
            |||||.|||.||...|...||.||.|..|:...|.:||  |||.|..|..|.|..||:|..|::|
Zfish   202 RPRDDFFGHYTCDHNGNKTCLEGWAGPECNTAICKQGCSIEHGSCKVPGNCRCLYGWQGEYCDQC 266

  Fly   261 VLEPNCIHGTCNKPWTCICNEGWGGLYCNQDLNYCTNHRPCKNGGTCFNTGEGLYTCKCAPGYSG 325
            :..|.|:||||.:||.|:|:..|||..|::|||.|...:||.|||||.|||...|.|.|..||||
Zfish   267 IPHPGCVHGTCIEPWQCLCDTNWGGQLCDKDLNTCGTLQPCLNGGTCSNTGPDKYHCACPEGYSG 331

  Fly   326 DDCENEIYSCDADVNPCQNGGTCIDEPHTKTGYKCHCANGWSGKMCEEKVLTCSDKPC-HQGICR 389
            .:||....:|.::  ||.|||.|::   :..|::|.||.||:|..|......||..|| |.|:|.
Zfish   332 QNCERADNACLSE--PCLNGGLCVE---SSLGFECQCAAGWTGPSCNINEDDCSPNPCNHSGVCV 391

  Fly   390 NVRPGLGSKGQGYQCECPIGYSGPNCDLQLDNCSPNPCINGGSCQP--SGK-CICPAGFSGTRCE 451
            ::       ..|::|.||:.::|..|.:..:.|..:||:|..||:.  .|. |.|..|::|..|:
Zfish   392 DL-------VDGFKCICPVQWTGKTCLIDANECEESPCVNAHSCRNLIGGYFCECLPGWTGQNCD 449

  Fly   452 TNIDDCLGHQCENGGTCIDMVNQYRCQCVPGFHGTHCSSKVDLCLIRPCANGGTCLNLNNDYQCT 516
            .|::||.| ||.|||.|.|:||.|||.|..||.|..|...||.|..|||.|||.|.:..|.:||.
Zfish   450 INVNDCHG-QCLNGGLCKDLVNGYRCVCAAGFAGDRCERDVDECASRPCLNGGRCQDTLNGFQCL 513

  Fly   517 CRAGFTGKDCSVDIDECSSGPCHNGGTCMNRVNSFECVCANGFRGKQCDEESYDSVTFDAHQYGA 581
            |..||:|..|.:|:|.|.||||.||..|.:..:.:.|.|...:.||.|.:.....:         
Zfish   514 CPPGFSGATCQLDLDYCESGPCQNGAQCFSLASDYYCKCPEDYEGKNCSQLKDHCL--------- 569

  Fly   582 TTQARADGLTNAQVVLIAVFSVAMPLVAVIAACVVFCMKRKRKRAQEKDDAEARKQNEQNAVATM 646
                    :|..|               ||.:|.|                         ||.: 
Zfish   570 --------ITPCQ---------------VIDSCTV-------------------------AVVS- 585

  Fly   647 HHNGSGVGVALASASLGGKTG-----SNSGLTFDGGNPNIIKNTWDKSVNNICASAAAAAAAAAA 706
              |.:..|:.|.|:|:.|..|     |::|..|.....:....|:.....|.|.|:...:.....
Zfish   586 --NSTPGGLRLISSSVCGPHGRCRSHSHAGGHFSCDCQDGFTGTYCHENINDCESSPCLSGGTCI 648

  Fly   707 ----ADECLMYGGYVASVADNNNANSDFC-VAPLQRAKSQKQLNTD-----------PTLMHRGS 755
                |.:|:...|:   ...|...|.|.| ..|.:.....:.|..|           .|...|.|
Zfish   649 DKINAYQCICADGW---EGPNCETNIDDCRTNPCRDRGVCRDLVNDFYCECENGWKGKTCHSRES 710

  Fly   756 PAGSSAKGASGGGPGAAEGKRISVLGEGSYCSQRWPSLAAAGVA-------GACSSQLMAAASVA 813
            ......  .:.||..:.||.....|     ||..|.. |...:|       ..|.:.  |...|.
Zfish   711 QCDEDT--CNNGGTCSDEGDSFKCL-----CSPGWEG-ATCNIAKNSSCLPNPCENG--ATCVVT 765

  Fly   814 GSG 816
            |.|
Zfish   766 GDG 768

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DlNP_001247193.1 MNNL 23..96 CDD:284966 29/73 (40%)
DSL 164..226 CDD:279722 31/61 (51%)
EGF_CA 291..329 CDD:238011 21/37 (57%)
EGF_CA 337..372 CDD:238011 13/34 (38%)
EGF_CA 453..488 CDD:238011 20/34 (59%)
EGF_CA 492..526 CDD:238011 17/33 (52%)
EGF_CA 529..564 CDD:238011 14/34 (41%)
jag1aXP_005168261.1 MNNL 29..103 CDD:284966 29/73 (40%)
DSL 168..230 CDD:279722 31/61 (51%)
EGF_CA 297..335 CDD:238011 21/37 (57%)
EGF 341..370 CDD:278437 13/33 (39%)
EGF_CA 375..410 CDD:238011 12/41 (29%)
EGF_CA 413..448 CDD:238011 11/34 (32%)
EGF_CA 451..486 CDD:238011 20/35 (57%)
EGF_CA 488..524 CDD:238011 17/35 (49%)
EGF_CA 526..561 CDD:238011 14/34 (41%)
EGF_CA 632..668 CDD:238011 7/38 (18%)
EGF_CA 670..705 CDD:238011 6/34 (18%)
EGF 712..742 CDD:278437 8/37 (22%)
EGF 751..781 CDD:278437 5/20 (25%)
EGF_CA 787..820 CDD:238011
EGF_CA 823..859 CDD:238011
VWC_out 866..934 CDD:214565
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578044
Domainoid 1 1.000 50 1.000 Domainoid score I11640
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D197806at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.850

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