DRSC/TRiP Functional Genomics Resources

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Protein Alignment Delta and jag1a

DIOPT Version :10

Sequence 1:NP_477264.1 Gene:Delta / 42313 FlyBaseID:FBgn0000463 Length:833 Species:Drosophila melanogaster
Sequence 2:XP_005168261.1 Gene:jag1a / 140421 ZFINID:ZDB-GENE-011128-2 Length:1253 Species:Danio rerio


Alignment Length:848 Identity:278/848 - (32%)
Similarity:389/848 - (45%) Gaps:132/848 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IKCLLTAFICFTVIVQVHSSGSFELRLKYFSNDHGRDNEGRCCSGESDGATGKCLG-SCKTRFRV 67
            ::||... :|       .:||.||:::....|.:|....|.||.|..|.|...|.. .|.|.|||
Zfish    18 LRCLWMR-VC-------EASGHFEMQVLSMQNVNGELQNGACCDGARDPAERSCAADQCDTFFRV 74

  Fly    68 CLKHYQATIDTTSQCTYGDVITPILGENSVNLTDAQRFQNKGFTNPIQFPFSFSWPGTFSLIVEA 132
            |||.||:.:.:...|:||...||::|.|:.::....:..:|   ..|..||||:||.:::|||||
Zfish    75 CLKEYQSRVSSGGPCSYGSGSTPVIGGNTFSVKPLDQTNDK---TRIVLPFSFAWPRSYTLIVEA 136

  Fly   133 WHDTNNSGNARTNKLLIQRLLVQQVLEVSSEWKTNKSESQYTSLEYDFRVTCDLNYYGSGCAKFC 197
            ....|:|.....|..:|::.:...::..:.:|:..|........:|..|||||.:|:|.||.|||
Zfish   137 LDFNNDSSTGSINGQVIEKAVQSGMINPNRQWQVLKHNGPVAQFQYQIRVTCDEHYFGFGCNKFC 201

  Fly   198 RPRDDSFGHSTCSETGEIICLTGWQGDYCHIPKCAKGC--EHGHCDKPNQCVCQLGWKGALCNEC 260
            |||||.|||.||...|...||.||.|..|:...|.:||  |||.|..|..|.|..||:|..|::|
Zfish   202 RPRDDFFGHYTCDHNGNKTCLEGWAGPECNTAICKQGCSIEHGSCKVPGNCRCLYGWQGEYCDQC 266

  Fly   261 VLEPNCIHGTCNKPWTCICNEGWGGLYCNQDLNYCTNHRPCKNGGTCFNTGEGLYTCKCAPGYSG 325
            :..|.|:||||.:||.|:|:..|||..|::|||.|...:||.|||||.|||...|.|.|..||||
Zfish   267 IPHPGCVHGTCIEPWQCLCDTNWGGQLCDKDLNTCGTLQPCLNGGTCSNTGPDKYHCACPEGYSG 331

  Fly   326 DDCENEIYSCDADVNPCQNGGTCIDEPHTKTGYKCHCANGWSGKMCEEKVLTCSDKPC-HQGICR 389
            .:||....:|.::  ||.|||.|::   :..|::|.||.||:|..|......||..|| |.|:|.
Zfish   332 QNCERADNACLSE--PCLNGGLCVE---SSLGFECQCAAGWTGPSCNINEDDCSPNPCNHSGVCV 391

  Fly   390 NVRPGLGSKGQGYQCECPIGYSGPNCDLQLDNCSPNPCINGGSCQP--SGK-CICPAGFSGTRCE 451
            ::       ..|::|.||:.::|..|.:..:.|..:||:|..||:.  .|. |.|..|::|..|:
Zfish   392 DL-------VDGFKCICPVQWTGKTCLIDANECEESPCVNAHSCRNLIGGYFCECLPGWTGQNCD 449

  Fly   452 TNIDDCLGHQCENGGTCIDMVNQYRCQCVPGFHGTHCSSKVDLCLIRPCANGGTCLNLNNDYQCT 516
            .|::||.| ||.|||.|.|:||.|||.|..||.|..|...||.|..|||.|||.|.:..|.:||.
Zfish   450 INVNDCHG-QCLNGGLCKDLVNGYRCVCAAGFAGDRCERDVDECASRPCLNGGRCQDTLNGFQCL 513

  Fly   517 CRAGFTGKDCSVDIDECSSGPCHNGGTCMNRVNSFECVCANGFRGKQCDEESYDSVTFDAHQYGA 581
            |..||:|..|.:|:|.|.||||.||..|.:..:.:.|.|...:.||.|.:.....:         
Zfish   514 CPPGFSGATCQLDLDYCESGPCQNGAQCFSLASDYYCKCPEDYEGKNCSQLKDHCL--------- 569

  Fly   582 TTQARADGLTNAQVVLIAVFSVAMPLVAVIAACVVFCMKRKRKRAQEKDDAEARKQNEQNAVATM 646
                    :|..|               ||.:|.|                         ||.: 
Zfish   570 --------ITPCQ---------------VIDSCTV-------------------------AVVS- 585

  Fly   647 HHNGSGVGVALASASLGGKTG-----SNSGLTFDGGNPNIIKNTWDKSVNNICASAAAAAAAAAA 706
              |.:..|:.|.|:|:.|..|     |::|..|.....:....|:.....|.|.|:...:.....
Zfish   586 --NSTPGGLRLISSSVCGPHGRCRSHSHAGGHFSCDCQDGFTGTYCHENINDCESSPCLSGGTCI 648

  Fly   707 ----ADECLMYGGYVASVADNNNANSDFC-VAPLQRAKSQKQLNTD-----------PTLMHRGS 755
                |.:|:...|:   ...|...|.|.| ..|.:.....:.|..|           .|...|.|
Zfish   649 DKINAYQCICADGW---EGPNCETNIDDCRTNPCRDRGVCRDLVNDFYCECENGWKGKTCHSRES 710

  Fly   756 PAGSSAKGASGGGPGAAEGKRISVLGEGSYCSQRWPSLAAAGVA-------GACSSQLMAAASVA 813
            ......  .:.||..:.||.....|     ||..|.. |...:|       ..|.:.  |...|.
Zfish   711 QCDEDT--CNNGGTCSDEGDSFKCL-----CSPGWEG-ATCNIAKNSSCLPNPCENG--ATCVVT 765

  Fly   814 GSG 816
            |.|
Zfish   766 GDG 768

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DeltaNP_477264.1 MNNL 23..182 CDD:462222 50/159 (31%)
DSL 164..226 CDD:128366 31/61 (51%)
EGF_CA 291..329 CDD:238011 21/37 (57%)
EGF_CA 337..372 CDD:238011 13/34 (38%)
EGF_CA 453..488 CDD:238011 20/34 (59%)
EGF_CA 492..526 CDD:238011 17/33 (52%)
EGF_CA 529..564 CDD:238011 14/34 (41%)
jag1aXP_005168261.1 MNNL 29..186 CDD:462222 50/159 (31%)
DSL 168..230 CDD:128366 31/61 (51%)
EGF_CA 297..335 CDD:238011 21/37 (57%)
EGF 341..370 CDD:394967 13/33 (39%)
EGF_CA 375..410 CDD:238011 12/41 (29%)
EGF_CA 413..448 CDD:238011 11/34 (32%)
EGF_CA 451..486 CDD:238011 20/35 (57%)
EGF_CA 488..524 CDD:238011 17/35 (49%)
EGF_CA 526..561 CDD:238011 14/34 (41%)
EGF_CA 632..668 CDD:238011 7/38 (18%)
EGF_CA 670..705 CDD:238011 6/34 (18%)
EGF 712..742 CDD:394967 8/37 (22%)
EGF 751..781 CDD:394967 5/20 (25%)
EGF_CA 787..820 CDD:238011
EGF_CA 823..859 CDD:238011
VWC_out 866..934 CDD:214565
Blue background indicates that the domain is not in the aligned region.

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