DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dl and sned1

DIOPT Version :9

Sequence 1:NP_001247193.1 Gene:Dl / 42313 FlyBaseID:FBgn0000463 Length:833 Species:Drosophila melanogaster
Sequence 2:XP_012826283.1 Gene:sned1 / 100498350 XenbaseID:XB-GENE-940133 Length:1667 Species:Xenopus tropicalis


Alignment Length:719 Identity:206/719 - (28%)
Similarity:290/719 - (40%) Gaps:177/719 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 GSGCAKFCRPRDDSFGHSTCSETGEIICLTGWQGDYCHIP--KC-AKGCEH-GHC-DKPNQ--CV 247
            |..|...|...:.|:   |||      ||:|:.|.:|||.  || ::.|:: |.| |:|..  |:
 Frog   276 GGRCIDDCVTGNPSY---TCS------CLSGFTGKHCHIDMGKCYSQPCQNDGTCVDEPGSFTCL 331

  Fly   248 CQLGWKGALCNECVLEPNCIHGTC---------NKPWTCICNEGWGGLYCNQDLNYCTNHRPCKN 303
            |...:.|.|| |..:.| |.:.||         |....|:|..|:.|..|:.:|..|:: .||.|
 Frog   332 CTSDFTGTLC-ETEVSP-CTYMTCHNGGECEDHNGIAVCVCQRGYTGDNCDTELLPCSS-SPCLN 393

  Fly   304 GGTCFNTGEGLYTCKCAPGYSGDDCENEIYSCDADVNPCQNGGTCIDEPHTKTGYKCHCANGWSG 368
            ||:|.|...| :.|:||.|::|..||.|..:|.:  :||.|.|.|.|   ...||.|.|..|::|
 Frog   394 GGSCENIDAG-FRCQCALGFTGTHCEKEPSACFS--SPCMNNGVCKD---VGAGYICVCVQGFTG 452

  Fly   369 KMCEEKVLTCSDKPC-HQGICR---------------------NVRP-------GLGS---KGQG 401
            ..||.::..||..|| ::|:||                     .:||       .:|:   ..:|
 Frog   453 MYCETEIRPCSSAPCLNRGVCRENGETYSCQCARRFTGKHCETEIRPCFSNPCMNMGTCEDMSEG 517

  Fly   402 YQCECPIGYSGPNCDLQLDNCSPNPCINGGSCQPSG---KCICPAGFSGTRCETNIDDCLGHQCE 463
            |.|.|..||:|.:|:.:|..|..:||:||..|:..|   .|:|..||:|.||||.:..|....|.
 Frog   518 YSCICTEGYTGIHCETELRPCYSSPCLNGALCKDFGITYSCVCAWGFTGARCETELHPCFSSPCL 582

  Fly   464 NGGTCIDMVNQYRCQCVPGFHGTHCSSKVDLCLIRPCANGGTCLNL------------------- 509
            ||.||.|:...|.|||..||.|.||.:::..|...||.|||||.:|                   
 Frog   583 NGATCRDVGFAYSCQCAQGFTGMHCETEIKPCFSSPCLNGGTCEDLAISFACLCAERYTGLHCET 647

  Fly   510 ----------------NND---YQCTCRAGFTGKDCSVDIDECSSGPCHNGGTCMNRVNSFECVC 555
                            ||:   |.|||..||||::|..::..|.|.||.||.||::...|:.|:|
 Frog   648 EIQPCFSSPCLNRGICNNEGAFYSCTCAEGFTGENCEKEVSPCLSSPCLNGATCIDMGASYSCMC 712

  Fly   556 ANGFRGKQCDEESYDSVTFD-AHQYGATTQARADGLTNAQVVLIAVFSVAMPLVAVIAACVVFCM 619
            ...|.|..||.|.....|.: ....|...:|....|.:..    |.||            .:.|.
 Frog   713 PQAFTGALCDTEIPSPCTSNPCENKGVCREAEGGYLCDCP----AGFS------------GMHCE 761

  Fly   620 KRKRKRAQEKDDAEARKQNE-QNAVATMHHNGSGVG------VALASASLGGKTGSNSGLTFDGG 677
            .|      ..||...|.... .:..:|.|......|      |.....|:|.:..........||
 Frog   762 HR------VSDDCPCRNGGRCADGNSTCHCPPGHFGLLCEYEVTSLPCSMGSQCPDGGSCMEYGG 820

  Fly   678 NPNIIKNT----WDKSVNNICASAAAAAAAAAAADECLMYGGYVASVADNNNANSDFCVAPLQRA 738
            :...:.:|    .:.|:.:.|.|           |.|| .||...|:.|     :..|..|    
 Frog   821 SYLCVCHTDYILSNHSIPSPCDS-----------DPCL-NGGTCESLDD-----AYTCACP---- 864

  Fly   739 KSQKQLNTDPTLMHRGSPAGSSAKGASGGGPGAAEGKRISVLGEGSYCSQRWP---SLAAAGVAG 800
                 ...:..|..:..||..|......||. ..|.:      |..||...:|   .....|:.|
 Frog   865 -----RGFNGRLCEKVKPALCSLSPCRNGGT-CKESR------EEYYCVCPYPFTGKHCETGMRG 917

  Fly   801 ACSS 804
            .|||
 Frog   918 PCSS 921

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DlNP_001247193.1 MNNL 23..96 CDD:284966
DSL 164..226 CDD:279722 11/35 (31%)
EGF_CA 291..329 CDD:238011 15/37 (41%)
EGF_CA 337..372 CDD:238011 12/34 (35%)
EGF_CA 453..488 CDD:238011 14/34 (41%)
EGF_CA 492..526 CDD:238011 19/71 (27%)
EGF_CA 529..564 CDD:238011 13/34 (38%)
sned1XP_012826283.1 NIDO 99..251 CDD:214712
EGF_CA 267..303 CDD:238011 11/35 (31%)
EGF_CA <314..342 CDD:238011 10/28 (36%)
EGF_CA 387..418 CDD:238011 13/32 (41%)
EGF_CA <427..456 CDD:238011 12/31 (39%)
EGF 462..492 CDD:278437 7/29 (24%)
EGF_CA <503..532 CDD:238011 8/28 (29%)
EGF_CA <579..608 CDD:238011 14/28 (50%)
EGF_CA <617..646 CDD:238011 8/28 (29%)
EGF 652..682 CDD:278437 10/29 (34%)
EGF_CA 690..721 CDD:238011 13/30 (43%)
EGF_CA 730..761 CDD:238011 7/46 (15%)
EGF_CA 841..873 CDD:238011 12/57 (21%)
EGF_CA 881..912 CDD:238011 8/37 (22%)
EGF_CA 920..951 CDD:238011 2/2 (100%)
CCP 957..1011 CDD:153056
EGF_CA 1013..1048 CDD:238011
EGF_CA 1052..1086 CDD:238011
EGF_CA 1089..1124 CDD:238011
fn3 1176..1244 CDD:278470
fn3 1262..1344 CDD:278470
FN3 1360..1448 CDD:238020
MAGP <1594..1641 CDD:283223
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D197806at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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